G724048


Basic Information

Item Value
gene id G724048
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 55513688 ~ 55514023 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU822519
tgggcatcacggattttcaactccctccaaagattttctatggggttgagatctggagactggctaggccactccaggaccttgaaatgcttcttacgaagtcactccttcgttgcccgggcggtgtgtttgagatcattgtcatgctgaaagacccagccacgtttcatcttcaatgcccttgctgatggaaggatttcactcaaaatctcatgatacatggccccaatcattctttcctttacacggatcagtcgtcctggtccctttgcagaaaaacagccccaaagcatgatgtttccacccccatgcgtcacagtaggtatggtgttcttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU822519 True 336 lncRNA 0.48 1 55513688 55514023

Neighbor

gene id symbol gene type direction distance location
cox-2 cox-2 coding upstream 29440 55479560 ~ 55484248 (+)
LOC110530939 LOC106568914 coding upstream 52617 55457870 ~ 55461071 (+)
si:ch211-106h4.9 LOC106568916 coding upstream 98473 55334832 ~ 55415215 (+)
e2f5 LOC106568921 coding upstream 209214 55299130 ~ 55304474 (+)
lrrcc1 lrrcc1 coding upstream 220444 55270257 ~ 55293244 (+)
LOC110530169 LOC106568913 coding downstream 15102 55529125 ~ 55533530 (+)
LOC118965530 NA coding downstream 33996 55548019 ~ 55550286 (+)
LOC110530940 NA coding downstream 35866 55549889 ~ 55556293 (+)
LOC110530941 LOC106568999 coding downstream 111948 55625971 ~ 55630214 (+)
LOC110530172 LOC106568908 coding downstream 117901 55631924 ~ 55682922 (+)
G724046 NA non-coding upstream 833 55512622 ~ 55512855 (+)
G724035 NA non-coding upstream 5927 55507530 ~ 55507761 (+)
G724034 NA non-coding upstream 6356 55507106 ~ 55507332 (+)
G724030 NA non-coding upstream 9026 55504451 ~ 55504662 (+)
G724027 NA non-coding upstream 9747 55503625 ~ 55503941 (+)
G724054 NA non-coding downstream 5048 55519071 ~ 55519290 (+)
G724056 NA non-coding downstream 5736 55519759 ~ 55519963 (+)
G724057 NA non-coding downstream 5953 55519976 ~ 55520299 (+)
G724096 LOC106568909 non-coding downstream 73544 55587567 ~ 55614889 (+)
LOC110530153 LOC106568927 other upstream 377057 55120291 ~ 55136638 (+)
LOC118965528 LOC106568937 other upstream 843574 54557953 ~ 54670115 (+)
rps28 NA other upstream 1585729 53926018 ~ 53927959 (+)
mrpl34 mrpl34 other upstream 1841829 53670348 ~ 53674103 (+)
si:ch211-267e7.3 LOC106568906 other downstream 196217 55710156 ~ 55724271 (+)
G725573 NA other downstream 1469547 56983570 ~ 56984285 (+)
LOC110530213 LOC106568871 other downstream 1954849 57421244 ~ 57478855 (+)
G725878 NA other downstream 1999583 57513606 ~ 57515394 (+)
G725907 LOC106581475 other downstream 2040700 57554723 ~ 57555482 (+)

Expression


Co-expression Network