Gene
RNA
| Item | Value |
|---|---|
| gene id | G724054 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 55519071 ~ 55519290 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU822525 | True | 220 | lncRNA | 0.47 | 1 | 55519071 | 55519290 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cox-2 | cox-2 | coding | upstream | 34823 | 55479560 ~ 55484248 (+) |
| LOC110530939 | LOC106568914 | coding | upstream | 58000 | 55457870 ~ 55461071 (+) |
| si:ch211-106h4.9 | LOC106568916 | coding | upstream | 103856 | 55334832 ~ 55415215 (+) |
| e2f5 | LOC106568921 | coding | upstream | 214597 | 55299130 ~ 55304474 (+) |
| lrrcc1 | lrrcc1 | coding | upstream | 225827 | 55270257 ~ 55293244 (+) |
| LOC110530169 | LOC106568913 | coding | downstream | 9835 | 55529125 ~ 55533530 (+) |
| LOC118965530 | NA | coding | downstream | 28729 | 55548019 ~ 55550286 (+) |
| LOC110530940 | NA | coding | downstream | 30599 | 55549889 ~ 55556293 (+) |
| LOC110530941 | LOC106568999 | coding | downstream | 106681 | 55625971 ~ 55630214 (+) |
| LOC110530172 | LOC106568908 | coding | downstream | 112634 | 55631924 ~ 55682922 (+) |
| G724048 | NA | non-coding | upstream | 5048 | 55513688 ~ 55514023 (+) |
| G724046 | NA | non-coding | upstream | 6216 | 55512622 ~ 55512855 (+) |
| G724035 | NA | non-coding | upstream | 11310 | 55507530 ~ 55507761 (+) |
| G724034 | NA | non-coding | upstream | 11739 | 55507106 ~ 55507332 (+) |
| G724030 | NA | non-coding | upstream | 14409 | 55504451 ~ 55504662 (+) |
| G724056 | NA | non-coding | downstream | 469 | 55519759 ~ 55519963 (+) |
| G724057 | NA | non-coding | downstream | 686 | 55519976 ~ 55520299 (+) |
| G724096 | LOC106568909 | non-coding | downstream | 68277 | 55587567 ~ 55614889 (+) |
| G724133 | NA | non-coding | downstream | 97776 | 55617066 ~ 55617279 (+) |
| LOC110530153 | LOC106568927 | other | upstream | 382440 | 55120291 ~ 55136638 (+) |
| LOC118965528 | LOC106568937 | other | upstream | 848957 | 54557953 ~ 54670115 (+) |
| rps28 | NA | other | upstream | 1591112 | 53926018 ~ 53927959 (+) |
| mrpl34 | mrpl34 | other | upstream | 1847212 | 53670348 ~ 53674103 (+) |
| si:ch211-267e7.3 | LOC106568906 | other | downstream | 190950 | 55710156 ~ 55724271 (+) |
| G725573 | NA | other | downstream | 1464280 | 56983570 ~ 56984285 (+) |
| LOC110530213 | LOC106568871 | other | downstream | 1949582 | 57421244 ~ 57478855 (+) |
| G725878 | NA | other | downstream | 1994316 | 57513606 ~ 57515394 (+) |
| G725907 | LOC106581475 | other | downstream | 2035433 | 57554723 ~ 57555482 (+) |
