Gene
RNA
| Item | Value |
|---|---|
| gene id | G724096 |
| gene name | LOC106568909 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 55587567 ~ 55614889 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| retinoic acid receptor RXR-gamma-A-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU822575 | True | 555 | lncRNA | 0.54 | 2 | 55587567 | 55614889 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530940 | NA | coding | upstream | 32773 | 55549889 ~ 55556293 (+) |
| LOC118965530 | NA | coding | upstream | 37281 | 55548019 ~ 55550286 (+) |
| LOC110530169 | LOC106568913 | coding | upstream | 54037 | 55529125 ~ 55533530 (+) |
| cox-2 | cox-2 | coding | upstream | 103319 | 55479560 ~ 55484248 (+) |
| LOC110530939 | LOC106568914 | coding | upstream | 126496 | 55457870 ~ 55461071 (+) |
| LOC110530941 | LOC106568999 | coding | downstream | 11082 | 55625971 ~ 55630214 (+) |
| LOC110530172 | LOC106568908 | coding | downstream | 17035 | 55631924 ~ 55682922 (+) |
| si:ch211-267e7.3 | LOC106568906 | coding | downstream | 95267 | 55710156 ~ 55724271 (+) |
| frrs1a | LOC106568904 | coding | downstream | 171592 | 55786481 ~ 55800644 (+) |
| LOC110530181 | LOC106568899 | coding | downstream | 301016 | 55915905 ~ 55978796 (+) |
| G724057 | NA | non-coding | upstream | 67268 | 55519976 ~ 55520299 (+) |
| G724056 | NA | non-coding | upstream | 67604 | 55519759 ~ 55519963 (+) |
| G724054 | NA | non-coding | upstream | 68277 | 55519071 ~ 55519290 (+) |
| G724048 | NA | non-coding | upstream | 73544 | 55513688 ~ 55514023 (+) |
| G724133 | NA | non-coding | downstream | 2177 | 55617066 ~ 55617279 (+) |
| G724140 | NA | non-coding | downstream | 10742 | 55625631 ~ 55625854 (+) |
| G724152 | NA | non-coding | downstream | 47701 | 55662590 ~ 55666363 (+) |
| G724154 | NA | non-coding | downstream | 53328 | 55668217 ~ 55668558 (+) |
| LOC110530153 | LOC106568927 | other | upstream | 450936 | 55120291 ~ 55136638 (+) |
| LOC118965528 | LOC106568937 | other | upstream | 917453 | 54557953 ~ 54670115 (+) |
| rps28 | NA | other | upstream | 1659608 | 53926018 ~ 53927959 (+) |
| mrpl34 | mrpl34 | other | upstream | 1915708 | 53670348 ~ 53674103 (+) |
| G725573 | NA | other | downstream | 1368681 | 56983570 ~ 56984285 (+) |
| LOC110530213 | LOC106568871 | other | downstream | 1853983 | 57421244 ~ 57478855 (+) |
| G725878 | NA | other | downstream | 1898717 | 57513606 ~ 57515394 (+) |
| G725907 | LOC106581475 | other | downstream | 1939834 | 57554723 ~ 57555482 (+) |
