G724140


Basic Information

Item Value
gene id G724140
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 55625631 ~ 55625854 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU822619
aggcagaatagtcaggcaggtgggtacaaagtccagaacaggcaagggtcaaaaccgggtggactagaaaaaggagaaaaggCAAAGCAGGAAAACACACTGGTAGGCTTGGACATTCAAGACACACTGGTAGGCTTGGACATTccagacgaactggcacagagagacaggaaacacatggatATATCCTTGATAACAAGCCAATGTTCGGCTAGAGGATGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU822619 True 224 lncRNA 0.48 1 55625631 55625854

Neighbor

gene id symbol gene type direction distance location
LOC110530940 NA coding upstream 70837 55549889 ~ 55556293 (+)
LOC118965530 NA coding upstream 75345 55548019 ~ 55550286 (+)
LOC110530169 LOC106568913 coding upstream 92101 55529125 ~ 55533530 (+)
cox-2 cox-2 coding upstream 141383 55479560 ~ 55484248 (+)
LOC110530939 LOC106568914 coding upstream 164560 55457870 ~ 55461071 (+)
LOC110530941 LOC106568999 coding downstream 117 55625971 ~ 55630214 (+)
LOC110530172 LOC106568908 coding downstream 6070 55631924 ~ 55682922 (+)
si:ch211-267e7.3 LOC106568906 coding downstream 84302 55710156 ~ 55724271 (+)
frrs1a LOC106568904 coding downstream 160627 55786481 ~ 55800644 (+)
LOC110530181 LOC106568899 coding downstream 290051 55915905 ~ 55978796 (+)
G724133 NA non-coding upstream 8352 55617066 ~ 55617279 (+)
G724096 LOC106568909 non-coding upstream 10742 55587567 ~ 55614889 (+)
G724057 NA non-coding upstream 105332 55519976 ~ 55520299 (+)
G724056 NA non-coding upstream 105668 55519759 ~ 55519963 (+)
G724152 NA non-coding downstream 36736 55662590 ~ 55666363 (+)
G724154 NA non-coding downstream 42363 55668217 ~ 55668558 (+)
G724191 NA non-coding downstream 112588 55738442 ~ 55739151 (+)
G724192 LOC106568905 non-coding downstream 113885 55739739 ~ 55740547 (+)
LOC110530153 LOC106568927 other upstream 489000 55120291 ~ 55136638 (+)
LOC118965528 LOC106568937 other upstream 955517 54557953 ~ 54670115 (+)
rps28 NA other upstream 1697672 53926018 ~ 53927959 (+)
mrpl34 mrpl34 other upstream 1953772 53670348 ~ 53674103 (+)
G725573 NA other downstream 1357716 56983570 ~ 56984285 (+)
LOC110530213 LOC106568871 other downstream 1843018 57421244 ~ 57478855 (+)
G725878 NA other downstream 1887752 57513606 ~ 57515394 (+)
G725907 LOC106581475 other downstream 1928869 57554723 ~ 57555482 (+)

Expression


Co-expression Network