G724192 (LOC106568905)


Basic Information

Item Value
gene id G724192
gene name LOC106568905
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 55739739 ~ 55740547 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU822674
CTGTGCCAGGGGTGTCTCCAGTATGGTTGGTGTGTGCTGGTCGGGCAGACTGCCAAGCTTGTACTTGGGGCTGAACTGGATCAGGTGATGTCTGATGACTCCCACCAGCTCTTGGGCCCTGGGGTCCAGACTCACCCTGAAGGCGATGACGCTGCCGGGGGTGAGGCGCTCGAAGACGatctcctggacaaactcactgCTGCCCTTGGATGTCACCCCTGCATGTTTCACAACGCCACTGTCCTTCAGCTGGGGTGAATAAGACCATGGGTGAATACAGTTTCACTGCCACACAAAACAGTATCAAGGTCCACAATGGGTTATTGAGAGGAGAGTTGAAGACAATTCTGAATTGGCTTTTGCTGGTCTATATCAATTATG

Function

NR:

description
PREDICTED: glycogen debranching enzyme-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU822674 True 381 lncRNA 0.53 2 55739739 55740547

Neighbor

gene id symbol gene type direction distance location
si:ch211-267e7.3 LOC106568906 coding upstream 15468 55710156 ~ 55724271 (+)
LOC110530172 LOC106568908 coding upstream 56817 55631924 ~ 55682922 (+)
LOC110530941 LOC106568999 coding upstream 109525 55625971 ~ 55630214 (+)
LOC110530940 NA coding upstream 184945 55549889 ~ 55556293 (+)
LOC118965530 NA coding upstream 189453 55548019 ~ 55550286 (+)
frrs1a LOC106568904 coding downstream 45934 55786481 ~ 55800644 (+)
LOC110530181 LOC106568899 coding downstream 175358 55915905 ~ 55978796 (+)
LOC110530182 NA coding downstream 329432 56069979 ~ 56075431 (+)
LOC110530943 LOC106568897 coding downstream 373407 56113954 ~ 56250195 (+)
LOC118965531 NA coding downstream 553045 56293592 ~ 56305010 (+)
G724191 NA non-coding upstream 588 55738442 ~ 55739151 (+)
G724154 NA non-coding upstream 71181 55668217 ~ 55668558 (+)
G724152 NA non-coding upstream 73376 55662590 ~ 55666363 (+)
G724140 NA non-coding upstream 113885 55625631 ~ 55625854 (+)
G724237 LOC106568902 non-coding downstream 74839 55815386 ~ 55819692 (+)
G724428 NA non-coding downstream 105854 55846401 ~ 55846617 (+)
G724441 NA non-coding downstream 113891 55854438 ~ 55854956 (+)
G724451 NA non-coding downstream 128439 55868986 ~ 55869239 (+)
G724454 LOC106568900 non-coding downstream 132493 55873040 ~ 55879674 (+)
LOC110530939 LOC106568914 other upstream 279619 55457870 ~ 55461071 (+)
LOC110530153 LOC106568927 other upstream 603108 55120291 ~ 55136638 (+)
LOC118965528 LOC106568937 other upstream 1069625 54557953 ~ 54670115 (+)
rps28 NA other upstream 1811780 53926018 ~ 53927959 (+)
G725573 NA other downstream 1243023 56983570 ~ 56984285 (+)
LOC110530213 LOC106568871 other downstream 1728325 57421244 ~ 57478855 (+)
G725878 NA other downstream 1773059 57513606 ~ 57515394 (+)
G725907 LOC106581475 other downstream 1814176 57554723 ~ 57555482 (+)
LOC118965533 NA other downstream 2112465 57850799 ~ 57854417 (+)

Expression


Co-expression Network