G724428


Basic Information

Item Value
gene id G724428
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 55846401 ~ 55846617 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU822951
GTCCTGATGGCGTCCCCGCTCGTGTGCTCAGAGCATGTGCTGGGCAGCTGGCCgaggtcttcactgacattttcaacctataaCTGGCCCAGGCGGTTGTCCCCACGTGCTTCAAGACTACAAGCATTGTCCCAGTGCCGAAGCAGTCGACCGCATCAAGCCTGAATGACTTCCGACCTGTTGCACTCACGCCCAcgatcatgaagtgcttcgaaag

Function

NR:

description
PREDICTED: transmembrane protein 235-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU822951 True 217 lncRNA 0.57 1 55846401 55846617

Neighbor

gene id symbol gene type direction distance location
frrs1a LOC106568904 coding upstream 45757 55786481 ~ 55800644 (+)
si:ch211-267e7.3 LOC106568906 coding upstream 122130 55710156 ~ 55724271 (+)
LOC110530172 LOC106568908 coding upstream 163479 55631924 ~ 55682922 (+)
LOC110530941 LOC106568999 coding upstream 216187 55625971 ~ 55630214 (+)
LOC110530940 NA coding upstream 291607 55549889 ~ 55556293 (+)
LOC110530181 LOC106568899 coding downstream 69288 55915905 ~ 55978796 (+)
LOC110530182 NA coding downstream 223362 56069979 ~ 56075431 (+)
LOC110530943 LOC106568897 coding downstream 267337 56113954 ~ 56250195 (+)
LOC118965531 NA coding downstream 446975 56293592 ~ 56305010 (+)
LOC110530187 cnn3 coding downstream 558167 56404784 ~ 56424593 (+)
G724237 LOC106568902 non-coding upstream 26709 55815386 ~ 55819692 (+)
G724192 LOC106568905 non-coding upstream 105854 55739739 ~ 55740547 (+)
G724191 NA non-coding upstream 107250 55738442 ~ 55739151 (+)
G724154 NA non-coding upstream 177843 55668217 ~ 55668558 (+)
G724441 NA non-coding downstream 7821 55854438 ~ 55854956 (+)
G724451 NA non-coding downstream 22369 55868986 ~ 55869239 (+)
G724454 LOC106568900 non-coding downstream 26423 55873040 ~ 55879674 (+)
G724456 NA non-coding downstream 35962 55882579 ~ 55882942 (+)
G724457 NA non-coding downstream 36858 55883475 ~ 55883750 (+)
LOC110530939 LOC106568914 other upstream 386281 55457870 ~ 55461071 (+)
LOC110530153 LOC106568927 other upstream 709770 55120291 ~ 55136638 (+)
LOC118965528 LOC106568937 other upstream 1176287 54557953 ~ 54670115 (+)
rps28 NA other upstream 1918442 53926018 ~ 53927959 (+)
G725573 NA other downstream 1136953 56983570 ~ 56984285 (+)
LOC110530213 LOC106568871 other downstream 1622255 57421244 ~ 57478855 (+)
G725878 NA other downstream 1666989 57513606 ~ 57515394 (+)
G725907 LOC106581475 other downstream 1708106 57554723 ~ 57555482 (+)
LOC118965533 NA other downstream 2006395 57850799 ~ 57854417 (+)

Expression


Co-expression Network