G724441


Basic Information

Item Value
gene id G724441
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 55854438 ~ 55854956 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU822964
catataatcgatgcagtgcgcattcgcgaaaaaggactgtcgttgctccaacgtgtaccaaaccataaacaccaatgcctttcttaaaatcaatacacagaagtatatatttttaaacctgcatatttagctaaaagaaatccaggttagcaggcaatattaaccaggtgaaattgtgtcacttctcttgcgttcattgcacgcagagtcagggtatatgcaacagtttgggccgcctggctcatttcaaactaatttgccagaatgttacgtaattatgacataacattgaaggttgtgcaatgtaacaggaatatttagactgatggatgccacccgttagataaaatatggaacggttccgtactttagtgaaagaataaacatcttgttttcgagatgatagtttccggattcaaccatattaatgagctaaggctcgcatttctgtgtgttattatgtcataattaagtctatgatttgatagagcagtctgactgagcgatggtaggcaccag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU822964 True 519 lncRNA 0.39 1 55854438 55854956

Neighbor

gene id symbol gene type direction distance location
frrs1a LOC106568904 coding upstream 53794 55786481 ~ 55800644 (+)
si:ch211-267e7.3 LOC106568906 coding upstream 130167 55710156 ~ 55724271 (+)
LOC110530172 LOC106568908 coding upstream 171516 55631924 ~ 55682922 (+)
LOC110530941 LOC106568999 coding upstream 224224 55625971 ~ 55630214 (+)
LOC110530940 NA coding upstream 299644 55549889 ~ 55556293 (+)
LOC110530181 LOC106568899 coding downstream 60949 55915905 ~ 55978796 (+)
LOC110530182 NA coding downstream 215023 56069979 ~ 56075431 (+)
LOC110530943 LOC106568897 coding downstream 258998 56113954 ~ 56250195 (+)
LOC118965531 NA coding downstream 438636 56293592 ~ 56305010 (+)
LOC110530187 cnn3 coding downstream 549828 56404784 ~ 56424593 (+)
G724428 NA non-coding upstream 7821 55846401 ~ 55846617 (+)
G724237 LOC106568902 non-coding upstream 34746 55815386 ~ 55819692 (+)
G724192 LOC106568905 non-coding upstream 113891 55739739 ~ 55740547 (+)
G724191 NA non-coding upstream 115287 55738442 ~ 55739151 (+)
G724451 NA non-coding downstream 14030 55868986 ~ 55869239 (+)
G724454 LOC106568900 non-coding downstream 18084 55873040 ~ 55879674 (+)
G724456 NA non-coding downstream 27623 55882579 ~ 55882942 (+)
G724457 NA non-coding downstream 28519 55883475 ~ 55883750 (+)
G724458 NA non-coding downstream 28809 55883765 ~ 55884120 (+)
LOC110530939 LOC106568914 other upstream 394318 55457870 ~ 55461071 (+)
LOC110530153 LOC106568927 other upstream 717807 55120291 ~ 55136638 (+)
LOC118965528 LOC106568937 other upstream 1184324 54557953 ~ 54670115 (+)
rps28 NA other upstream 1926479 53926018 ~ 53927959 (+)
G725573 NA other downstream 1128614 56983570 ~ 56984285 (+)
LOC110530213 LOC106568871 other downstream 1613916 57421244 ~ 57478855 (+)
G725878 NA other downstream 1658650 57513606 ~ 57515394 (+)
G725907 LOC106581475 other downstream 1699767 57554723 ~ 57555482 (+)
LOC118965533 NA other downstream 1998056 57850799 ~ 57854417 (+)

Expression


Co-expression Network