G725438


Basic Information

Item Value
gene id G725438
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 56779331 ~ 56779681 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU824133
ATCTTGGAGTGCGTCTGAAAGTGGGCGTTGCAAAATAAGTGGGTGGATCAACAGCGATGGGGGTAACATTAGTGGGTGGATCAACAGCGATGGGGGTAACATTAGTGGGTGGATCAACAGCGATGGGGGTAACATTAGTGGGTGGATCAACAGCGTTGGGGGTAACATTAGTGGGTGGATCAACAGCGTTGGGGGTAACATTAGTGGGTGGATCAACAGCGAAGGGTGTAACATCAGTGGGTGGATCAACAGCGATGGGTGTAACATCAGTGGGTGGATCAACAGCAATGGGTGTAAAATCAGTGGGTGGACCAACAGCGATTGGTGTAACATCAGTGGGTGGATCAACAG

Function

NR:

description
PREDICTED: uncharacterized protein LOC106587709, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU824133 True 351 lncRNA 0.50 1 56779331 56779681

Neighbor

gene id symbol gene type direction distance location
lhx8a lhx8 coding upstream 111397 56663849 ~ 56667934 (+)
tyw3 tyw3 coding upstream 175166 56601898 ~ 56604165 (+)
LOC110530195 LOC106568885 coding upstream 203784 56558346 ~ 56575547 (+)
LOC110530188 LOC106568889 coding upstream 270023 56487054 ~ 56509308 (+)
tf tf coding upstream 309711 56465735 ~ 56469620 (+)
LOC110530204 LOC106569008 coding downstream 218747 56998428 ~ 57002561 (+)
LOC110530206 LOC106599164 coding downstream 266099 57045780 ~ 57079445 (+)
LOC110530207 ttpa coding downstream 301865 57081546 ~ 57086615 (+)
asph LOC106568874 coding downstream 328522 57108203 ~ 57130512 (+)
car8 car8 coding downstream 559904 57339585 ~ 57361813 (+)
G725352 NA non-coding upstream 86871 56648080 ~ 56692460 (+)
G725362 NA non-coding upstream 109440 56668354 ~ 56669891 (+)
G725340 NA non-coding upstream 139706 56639328 ~ 56639625 (+)
G725308 NA non-coding upstream 164937 56613962 ~ 56614394 (+)
G725293 NA non-coding upstream 170698 56608489 ~ 56608633 (+)
G725440 NA non-coding downstream 1218 56780899 ~ 56781196 (+)
G725411 NA non-coding downstream 3766 56783447 ~ 56784547 (+)
G725554 NA non-coding downstream 175294 56954975 ~ 56955181 (+)
G725577 NA non-coding downstream 210790 56990471 ~ 56990695 (+)
G725581 NA non-coding downstream 223003 57002684 ~ 57002920 (+)
si:ch211-267e7.3 LOC106568906 other upstream 1061094 55710156 ~ 55724271 (+)
LOC110530939 LOC106568914 other upstream 1319211 55457870 ~ 55461071 (+)
LOC110530153 LOC106568927 other upstream 1642700 55120291 ~ 55136638 (+)
LOC118965528 LOC106568937 other upstream 2109217 54557953 ~ 54670115 (+)
rps28 NA other upstream 2851372 53926018 ~ 53927959 (+)
G725573 NA other downstream 203889 56983570 ~ 56984285 (+)
LOC110530213 LOC106568871 other downstream 689191 57421244 ~ 57478855 (+)
G725878 NA other downstream 733925 57513606 ~ 57515394 (+)
G725907 LOC106581475 other downstream 775042 57554723 ~ 57555482 (+)
LOC118965533 NA other downstream 1073331 57850799 ~ 57854417 (+)

Expression


Co-expression Network