Gene
RNA
| Item | Value |
|---|---|
| gene id | G725554 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 56954975 ~ 56955181 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU824265 | True | 207 | lncRNA | 0.43 | 1 | 56954975 | 56955181 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lhx8a | lhx8 | coding | upstream | 287041 | 56663849 ~ 56667934 (+) |
| tyw3 | tyw3 | coding | upstream | 350810 | 56601898 ~ 56604165 (+) |
| LOC110530195 | LOC106568885 | coding | upstream | 379428 | 56558346 ~ 56575547 (+) |
| LOC110530188 | LOC106568889 | coding | upstream | 445667 | 56487054 ~ 56509308 (+) |
| tf | tf | coding | upstream | 485355 | 56465735 ~ 56469620 (+) |
| LOC110530204 | LOC106569008 | coding | downstream | 43247 | 56998428 ~ 57002561 (+) |
| LOC110530206 | LOC106599164 | coding | downstream | 90599 | 57045780 ~ 57079445 (+) |
| LOC110530207 | ttpa | coding | downstream | 126365 | 57081546 ~ 57086615 (+) |
| asph | LOC106568874 | coding | downstream | 153022 | 57108203 ~ 57130512 (+) |
| car8 | car8 | coding | downstream | 384404 | 57339585 ~ 57361813 (+) |
| G725411 | NA | non-coding | upstream | 170428 | 56783447 ~ 56784547 (+) |
| G725440 | NA | non-coding | upstream | 173779 | 56780899 ~ 56781196 (+) |
| G725438 | NA | non-coding | upstream | 175294 | 56779331 ~ 56779681 (+) |
| G725352 | NA | non-coding | upstream | 262515 | 56648080 ~ 56692460 (+) |
| G725362 | NA | non-coding | upstream | 285084 | 56668354 ~ 56669891 (+) |
| G725577 | NA | non-coding | downstream | 35290 | 56990471 ~ 56990695 (+) |
| G725581 | NA | non-coding | downstream | 47503 | 57002684 ~ 57002920 (+) |
| G725585 | LOC106568875 | non-coding | downstream | 52962 | 57008143 ~ 57025389 (+) |
| G725615 | NA | non-coding | downstream | 181651 | 57136832 ~ 57142701 (+) |
| G725809 | NA | non-coding | downstream | 452893 | 57408074 ~ 57408412 (+) |
| si:ch211-267e7.3 | LOC106568906 | other | upstream | 1236738 | 55710156 ~ 55724271 (+) |
| LOC110530939 | LOC106568914 | other | upstream | 1494855 | 55457870 ~ 55461071 (+) |
| LOC110530153 | LOC106568927 | other | upstream | 1818344 | 55120291 ~ 55136638 (+) |
| LOC118965528 | LOC106568937 | other | upstream | 2284861 | 54557953 ~ 54670115 (+) |
| rps28 | NA | other | upstream | 3027016 | 53926018 ~ 53927959 (+) |
| G725573 | NA | other | downstream | 28389 | 56983570 ~ 56984285 (+) |
| LOC110530213 | LOC106568871 | other | downstream | 513691 | 57421244 ~ 57478855 (+) |
| G725878 | NA | other | downstream | 558425 | 57513606 ~ 57515394 (+) |
| G725907 | LOC106581475 | other | downstream | 599542 | 57554723 ~ 57555482 (+) |
| LOC118965533 | NA | other | downstream | 897831 | 57850799 ~ 57854417 (+) |
