G725615


Basic Information

Item Value
gene id G725615
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 57136832 ~ 57142701 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU824329
ggctgccCCCGTTGAAAAGGTAGAGGAAGCCGCCCAAGTCGAGGAGGAAGTCGCCGCCATTGAGGAGGAAGCCGCACCAGTTGAGGAGGAGGTTGCTGAAGAGGCTGCCCCGGTTGAGGAAGTGGATTCACCCACAGAAGAAGCTGTTGAGGAGGAGGCCGCTGAGGAGGAAGTTGCTGCATCAGTTGAGGAGGAAGTCGCTGTTGAGGAAGAGGCTGCCCCCGCAGAAGAAGAGGCTGCACcagttgaggaggaggaggaagaggcagaggaggagccAGCAACAGAGGAGGAAGAGCTGGTAGAAGAAACAGCAGCAGAAGATTCAGAACAAACAGAAGAAGCCGAATCAGAAGCTGAGTCAGAAGAAACTCAACAGGAGGAAGCTCTTCGGGAAGAGTTTGCAGAGGAAGCAGCTGAAGTAGATGAGCTGGAGGAGTTGATAGAAGAGCTTTCCCAGGCAGAAGAACAGATGGAAGATGAGCCAACAGAAACGCAGAGCCTGCGGTCTCAGCGCGGTAAGACTGATTGAGGACCAGCCCACATCGCATCCCACTGAGCGCATGCAGTCGTGCTTTCCCACCTCCAGAGAATGAAAAGCGCCATCACGGCCTTCAACACTCTCTCCTATTTGTCCTATTTCTCACTCGCACACCCAGAAACTTGTTTTTCTCACTTCCAGAACTTGTTAGATTTTTTTCATTTaccctatatattttttttcctttttttttcttaTAATGACAAGTATCAATTAATTTCTCTTACAGATGTAGGTAGTTAATGGGAGGGTAGCTTTTCGCTAATGGAATGTAGTTTGTTTTCCATTTCCTGTGTATAGCAAGCAGAGGTACATGTTGCTAGTCAAAGAACTTCACGTCTGAGCCGAGTTCAGTTTTTTGTTAAATGTGAAGATGCAAAGCTGCAGTTTTGTATTACCAGTATGTATTGAGTCTACATGTCAAGATGTTGCATATCTAGGGCAAAGTTATGCTGACAGGTGAACAGACAAGTCTGGTGATGTAGGGTGAGTGTGTGAGCTTCCATATGTGTATGACTGAGAATGTGTAtagatgtacactacatgaccaaaagtatgtgaacacctgcttgtcgaacatatcattccaaaatcatgggcattaatatggagttggtctcccctttgctgctataacagccgccacttcactcttctgggaaggcttttctactagatgttggaacattgctgcggggacattcttccattcagccacaagaacatttgtgaggttgagcactgatgttgggcgattaggcctgcctcgcagtcggtgttccaattcatcccaaaggttttcgatggggttgaggtcagggctctgtacaggccagtcaagttgttccacactgatctcgacaaaccatttctaaatggaccttgctttgtgcatgggggcattgtcatactgaaacaggaaagggccttccccaaactgctgtCACAAAGTTAAAGCACAGAATCTGCTAGaatttcattgtatgctgtaccattatgatttcccttcactggaactaaggagcctagcccgaaccaataaaaacagccccagaccattattcctcctccaccaaacttcacagttagcactatgcattggggcaggtagcgttctccaggCATCCaataaacccagattcatcctttggactgccagatggtgaagcatgattcatcactccagagaacgcgtttccactgctccagagtccaatggcggtccgctttacaccactccagccaaagcTTGTCATcgcgtatggtgatcttaggcttgtatgtggctgctcggccatggaaacccatttcatgaagctccggacgaacagttattgtgctgacagctggggcagctctagcagggcagaaatttgactgacttgttggaaaggtggcatcctatgatggtgccacgtttaaAGTCATTGAGCtgttcagtaagaccattctacttccaatgtttgtttatggagattgcatggctttgtgctcaATTTTTATTAACCTGCCAGCAACGgcagtggctgaaatagctgaatccactaatttgaaggggtgtccacatacttttgtatatatagtgtatgtttgcGTGTGTGCATTTTATAGACTGTATGTCTATAAAACAATCCTATGAGCCGTAGTTCTCATTAATTAAGATGCGTTTGAGACTCATTTCAATTTCAGTTTTGTTTGTTCAAACTCCTAGTACCTTGCTCTCACTGTTACTTCTTTAATACTGAAAGTGTTTTTGACTTACTCATACCTCCAGCCAGAACGGTGAACATCTAACGGAACACAATGAGTTATCCCCAAGCCAGGCTTGTGTccatttttttactattttatttattttgtggtcttttttaaaaaaaatttttacTGTATTTGGGTTGGATGTAAACTCTCCAAATGGGAGAAATGTTGGCATATGCCATTTGTTCTGGGAAAAACTGATTTTTACCTGGAGACGAAGGAAGGGCATGTCTCAGAGTCTGGTAGTAACTCTTAGGTGCAGCTCAGTGTGGGCGTAGCTGTTATGGGTTAATGGTCTGACCCAACCCAGTCTCCTGATAAAACAGGCTGCTGTGCAGTGTCCCAGGTCCTCCAATAGATCTGCTCTCCACACGCACACACGTGGTCCAACAGGAACATGATTATTCGAAATTCATCAGTCAGTACACGtaaactgtaaaaaaatatatatatatatatatatatttaaagtcTGCGGCAGTAATGTTCATAAACGTTTGTTCCCTTTCTCTCTAAATGTACAGTTCCACTTTCACTTGTATATTAACTGGCTCAAGCCCAGGGTAAGTGCTTCATTTGGAACAAAGGTTTTTGAATGTCTGTAATTGTTGCTGATTTAGCAGACACCCGGACCACCTCTTTTTGTCCCTCTGCATGTGTTTCAGTGCGTGACCCCCCCAAACCAACTGTTCAAAGAGAAACACTGTTGTGCATCTAGAAGGGAACTTGAGTGTAACCTGCTCACTCTGTCCTAGCGACATCTAACTCGACTTGTGCTAGTATTTAATTTTGATGTTGTCGTTAATGATGTTGTCATGGTTTGTTTTTACTACAAGGATGATGCTAGCTCATGCTTTGAACTTAAGGCTGTACGGTGAAGGGAAAAAAAATGATTTCATTTTTTTCAAGGAAACTCAGTCGTGTGCTTAGTTTGTGTTCCTCCAACGATGTAATGTTTCTGTGAATTCAGAtgagtgtgtttttgtttgacatttttcCATTGTAGAAGTTTTCTGTACATTGTGGTAATAAGGGGCCTGCTGGATGAGATAATGGTGATAAGGTGATGGACTGTAGGGAATGCTGCAATGCAAATCTTCTCTGAGGAAACCAAATAACGGTTTGTTTCGATGTACACGAAAACAAGTGGTTGCAATCTAGTTCTTAGGACTTATTGTCTTTTTTCTATAACACTAGTGGGTCTTTTTCTATTACCTAACACTTTTGAAGTCAATGTGAATTTTTAACGTggtgttaattttacattatacAAAACTTTACAAGATAGATCTGTTCTagatttttaaataaaaatacacttttttAGGATCAGACCTTTTTAATTAtgaaaatttaaataaataaaaagtgctTCACTTTTTTCAAAGCCATATGTGACAGTTGAGGCTCTTCTGCTCAGAATGGACTGTACTCCAagggaaagacattccacaaccAGCAGTAACCGAAAACATCACTACAATCtcagtgtttattttttattgcaGTTCACATATGAACAGGGGTTTACACACAAAAACATGTTATACATAGAGGTAAACATAGTATCCAGCTGTATAGGCTAACAGGTTTTTAAATTATTGTGAAAATGCATTCTGTATGCAGAGTTGGACGGCTGTCACAGTTTCTATAAATCAGGGGTGTCGAACTCATTCCATGCAGGAcctagtgtctgcgggttttttttttttttttctttcaatgaGGACCTAGACACCCAGGGAGGAGCGAAAATccgcagacactcagccctccgtggaatgagtttgacacgtgctgtAAATGTTCTGTTCGAGGGCTGCAATAAAGGTTTGGGACAACA
>TU824330
ggctgccCCCGTTGAAAAGGTAGAGGAAGCCGCCCAAGTCGAGGAGGAAGTCGCCGCCATTGAGGAGGAAGCCGCACCAGTTGAGGAGGAGGTTGCTGAAGAGGCTGCCCCGGTTGAGGAAGTGGATTCACCCACAGAAGAAGCTGTTGAGGAGGAGGCCGCTGAGGAGGAAGTTGCTGCATCAGTTGAGGAGGAAGTCGCTGTTGAGGAAGAGGCTGCCCCCGCAGAAGAAGAGGCTGCACcagttgaggaggaggaggaagaggcagaggaggagccAGCAACAGAGGAGGAAGAGCTGGTAGAAGAAACAGCAGCAGAAGATTCAGAACAAACAGAAGAAGCCGAATCAGAAGCTGAGTCAGAAGAAACTCAACAGGAGGAAGCTCTTCGGGAAGAGTTTGCAGAGGAAGCAGCTGAAGTAGATGAGCTGGAGGAGTTGATAGAAGAGCTTTCCCAGGCAGAAGAACAGATGGAAGATGAGCCAACAGTGAGGTCAGTATCTTCTTTCCATAGAAACGCAGAGCCTGCGGTCTCAGCGCGGTAAGACTGATTGAGGACCAGCCCACATCGCATCCCACTGAGCGCATGCAGTCGTGCTTTCCCACCTCCAGAGAATGAAAAGCGCCATCACGGCCTTCAACACTCTCTCCTATTTGTCCTATTTCTCACTCGCACACCCAGAAACTTGTTTTTCTCACTTCCAGAACTTGTTAGATTTTTTTCATTTaccctatatattttttttcctttttttttcttaTAATGACAAGTATCAATTAATTTCTCTTACAGATGTAGGTAGTTAATGGGAGGGTAGCTTTTCGCTAATGGAATGTAGTTTGTTTTCCATTTCCTGTGTATAGCAAGCAGAGGTACATGTTGCTAGTCAAAGAACTTCACGTCTGAGCCGAGTTCAGTTTTTTGTTAAATGTGAAGATGCAAAGCTGCAGTTTTGTATTACCAGTATGTATTGAGTCTACATGTCAAGATGTTGCATATCTAGGGCAAAGTTATGCTGACAGGTGAACAGACAAGTCTGGTGATGTAGGGTGAGTGTGTGAGCTTCCATATGTGTATGACTGAGAATGTGTAtagatgtacactacatgaccaaaagtatgtgaacacctgcttgtcgaacatatcattccaaaatcatgggcattaatatggagttggtctcccctttgctgctataacagccgccacttcactcttctgggaaggcttttctactagatgttggaacattgctgcggggacattcttccattcagccacaagaacatttgtgaggttgagcactgatgttgggcgattaggcctgcctcgcagtcggtgttccaattcatcccaaaggttttcgatggggttgaggtcagggctctgtacaggccagtcaagttgttccacactgatctcgacaaaccatttctaaatggaccttgctttgtgcatgggggcattgtcatactgaaacaggaaagggccttccccaaactgctgtCACAAAGTTAAAGCACAGAATCTGCTAGaatttcattgtatgctgtaccattatgatttcccttcactggaactaaggagcctagcccgaaccaataaaaacagccccagaccattattcctcctccaccaaacttcacagttagcactatgcattggggcaggtagcgttctccaggCATCCaataaacccagattcatcctttggactgccagatggtgaagcatgattcatcactccagagaacgcgtttccactgctccagagtccaatggcggtccgctttacaccactccagccaaagcTTGTCATcgcgtatggtgatcttaggcttgtatgtggctgctcggccatggaaacccatttcatgaagctccggacgaacagttattgtgctgacagctggggcagctctagcagggcagaaatttgactgacttgttggaaaggtggcatcctatgatggtgccacgtttaaAGTCATTGAGCtgttcagtaagaccattctacttccaatgtttgtttatggagattgcatggctttgtgctcaATTTTTATTAACCTGCCAGCAACGgcagtggctgaaatagctgaatccactaatttgaaggggtgtccacatacttttgtatatatagtgtatgtttgcGTGTGTGCATTTTATAGACTGTATGTCTATAAAACAATCCTATGAGCCGTAGTTCTCATTAATTAAGATGCGTTTGAGACTCATTTCAATTTCAGTTTTGTTTGTTCAAACTCCTAGTACCTTGCTCTCACTGTTACTTCTTTAATACTGAAAGTGTTTTTGACTTACTCATACCTCCAGCCAGAACGGTGAACATCTAACGGAACACAATGAGTTATCCCCAAGCCAGGCTTGTGTccatttttttactattttatttattttgtggtcttttttaaaaaaaatttttacTGTATTTGGGTTGGATGTAAACTCTCCAAATGGGAGAAATGTTGGCATATGCCATTTGTTCTGGGAAAAACTGATTTTTACCTGGAGACGAAGGAAGGGCATGTCTCAGAGTCTGGTAGTAACTCTTAGGTGCAGCTCAGTGTGGGCGTAGCTGTTATGGGTTAATGGTCTGACCCAACCCAGTCTCCTGATAAAACAGGCTGCTGTGCAGTGTCCCAGGTCCTCCAATAGATCTGCTCTCCACACGCACACACGTGGTCCAACAGGAACATGATTATTCGAAATTCATCAGTCAGTACACGtaaactgtaaaaaaatatatatatatatatatatatttaaagtcTGCGGCAGTAATGTTCATAAACGTTTGTTCCCTTTCTCTCTAAATGTACAGTTCCACTTTCACTTGTATATTAACTGGCTCAAGCCCAGGGTAAGTGCTTCATTTGGAACAAAGGTTTTTGAATGTCTGTAATTGTTGCTGATTTAGCAGACACCCGGACCACCTCTTTTTGTCCCTCTGCATGTGTTTCAGTGCGTGACCCCCCCAAACCAACTGTTCAAAGAGAAACACTGTTGTGCATCTAGAAGGGAACTTGAGTGTAACCTGCTCACTCTGTCCTAGCGACATCTAACTCGACTTGTGCTAGTATTTAATTTTGATGTTGTCGTTAATGATGTTGTCATGGTTTGTTTTTACTACAAGGATGATGCTAGCTCATGCTTTGAACTTAAGGCTGTACGGTGAAGGGAAAAAAAATGATTTCATTTTTTTCAAGGAAACTCAGTCGTGTGCTTAGTTTGTGTTCCTCCAACGATGTAATGTTTCTGTGAATTCAGAtgagtgtgtttttgtttgacatttttcCATTGTAGAAGTTTTCTGTACATTGTGGTAATAAGGGGCCTGCTGGATGAGATAATGGTGATAAGGTGATGGACTGTAGGGAATGCTGCAATGCAAATCTTCTCTGAGGAAACCAAATAACGGTTTGTTTCGATGTACACGAAAACAAGTGGTTGCAATCTAGTTCTTAGGACTTATTGTCTTTTTTCTATAACACTAGTGGGTCTTTTTCTATTACCTAACACTTTTGAAGTCAATGTGAATTTTTAACGTggtgttaattttacattatacAAAACTTTACAAGATAGATCTGTTCTagatttttaaataaaaatacacttttttAGGATCAGACCTTTTTAATTAtgaaaatttaaataaataaaaagtgctTCACTTTTTTCAAAGCCATATGTGACAGTTGAGGCTCTTCTGCTCAGAATGGACTGTACTCCAagggaaagacattccacaaccAGCAGTAACCGAAAACATCACTACAATCtcagtgtttattttttattgcaGTTCACATATGAACAGGGGTTTACACACAAAAACATGTTATACATAGAGGTAAACATAGTATCCAGCTGTATAGGCTAACAGGTTTTTAAATTATTGTGAAAATGCATTCTGTATGCAGAGTTGGACGGCTGTCACAGTTTCTATAAATCAGGGGTGTCGAACTCATTCCATGCAGGAcctagtgtctgcgggttttttttttttttttctttcaatgaGGACCTAGACACCCAGGGAGGAGCGAAAATccgcagacactcagccctccgtggaatgagtttgacacgtgctgtAAATGTTCTGTTCGAGGGCTGCAATAAAGGTTTGGGACAACA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU824329 False 4142 lncRNA 0.43 5 57136832 57142701
TU824330 True 4167 lncRNA 0.43 5 57136832 57142701

Neighbor

gene id symbol gene type direction distance location
asph LOC106568874 coding upstream 6320 57108203 ~ 57130512 (+)
LOC110530207 ttpa coding upstream 50217 57081546 ~ 57086615 (+)
LOC110530206 LOC106599164 coding upstream 57387 57045780 ~ 57079445 (+)
LOC110530204 LOC106569008 coding upstream 134271 56998428 ~ 57002561 (+)
lhx8a lhx8 coding upstream 468898 56663849 ~ 56667934 (+)
car8 car8 coding downstream 196884 57339585 ~ 57361813 (+)
LOC110530213 LOC106568871 coding downstream 278543 57421244 ~ 57478855 (+)
LOC110530217 LOC106568867 coding downstream 415327 57558028 ~ 57572376 (+)
LOC110530216 LOC106568865 coding downstream 429950 57572651 ~ 57582193 (+)
eif4g1a NA coding downstream 455134 57597835 ~ 57625254 (+)
G725585 LOC106568875 non-coding upstream 111443 57008143 ~ 57025389 (+)
G725581 NA non-coding upstream 133912 57002684 ~ 57002920 (+)
G725577 NA non-coding upstream 146137 56990471 ~ 56990695 (+)
G725554 NA non-coding upstream 181651 56954975 ~ 56955181 (+)
G725411 NA non-coding upstream 352285 56783447 ~ 56784547 (+)
G725809 NA non-coding downstream 265373 57408074 ~ 57408412 (+)
G725818 NA non-coding downstream 275656 57418357 ~ 57418677 (+)
G725869 LOC106568870 non-coding downstream 357832 57500533 ~ 57503590 (+)
G725872 LOC106568870 non-coding downstream 363960 57506661 ~ 57507160 (+)
G725886 NA non-coding downstream 382145 57524846 ~ 57529724 (+)
G725573 NA other upstream 152547 56983570 ~ 56984285 (+)
si:ch211-267e7.3 LOC106568906 other upstream 1418595 55710156 ~ 55724271 (+)
LOC110530939 LOC106568914 other upstream 1676712 55457870 ~ 55461071 (+)
LOC110530153 LOC106568927 other upstream 2000201 55120291 ~ 55136638 (+)
LOC118965528 LOC106568937 other upstream 2466718 54557953 ~ 54670115 (+)
G725878 NA other downstream 370905 57513606 ~ 57515394 (+)
G725907 LOC106581475 other downstream 412022 57554723 ~ 57555482 (+)
LOC118965533 NA other downstream 710311 57850799 ~ 57854417 (+)
G727161 NA other downstream 1214338 58357039 ~ 58358245 (+)

Expression


Co-expression Network