G725872 (LOC106568870)


Basic Information

Item Value
gene id G725872
gene name LOC106568870
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 57506661 ~ 57507160 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU824618
TCCAGGACTGGACTCCATGGTAATAGTAATGCAGGATCCACTGGATTCCCTCCACATAGCACAACGCCTGATTTGCTAGAAACTCATCTGAGACCACCTCCACTCCCATCTTGGTCATGTAGTAGGTGCGTTTGTACTGTCTGAACTCTGCCTCAAACATGTCCTCTTCTTCACCATCCTCCTCAAAACCTCGACCAGGGGCTCGGTCCTTCCCGCCATCCAGAGTAGTTAGACGCAGAgagtcctgcacacacacacagacattgaaTATGGATTTCAAGACACGCATCTGTATTGGAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU824618 True 300 lncRNA 0.49 2 57506661 57507160

Neighbor

gene id symbol gene type direction distance location
LOC110530213 LOC106568871 coding upstream 27806 57421244 ~ 57478855 (+)
car8 car8 coding upstream 144848 57339585 ~ 57361813 (+)
asph LOC106568874 coding upstream 376149 57108203 ~ 57130512 (+)
LOC110530207 ttpa coding upstream 420046 57081546 ~ 57086615 (+)
LOC110530206 LOC106599164 coding upstream 427216 57045780 ~ 57079445 (+)
LOC110530217 LOC106568867 coding downstream 50868 57558028 ~ 57572376 (+)
LOC110530216 LOC106568865 coding downstream 65491 57572651 ~ 57582193 (+)
eif4g1a NA coding downstream 90675 57597835 ~ 57625254 (+)
LOC118965660 NA coding downstream 115553 57622713 ~ 57622840 (+)
LOC118965680 NA coding downstream 116111 57623271 ~ 57623401 (+)
G725869 LOC106568870 non-coding upstream 3071 57500533 ~ 57503590 (+)
G725818 NA non-coding upstream 87984 57418357 ~ 57418677 (+)
G725809 NA non-coding upstream 98249 57408074 ~ 57408412 (+)
G725615 NA non-coding upstream 363960 57136832 ~ 57142701 (+)
G725585 LOC106568875 non-coding upstream 481272 57008143 ~ 57025389 (+)
G725886 NA non-coding downstream 17686 57524846 ~ 57529724 (+)
G725892 NA non-coding downstream 29078 57536238 ~ 57536464 (+)
G725895 NA non-coding downstream 32133 57539293 ~ 57539548 (+)
G725905 NA non-coding downstream 42630 57549790 ~ 57550018 (+)
G725906 LOC106590568 non-coding downstream 45678 57552838 ~ 57553144 (+)
G725573 NA other upstream 522376 56983570 ~ 56984285 (+)
si:ch211-267e7.3 LOC106568906 other upstream 1788424 55710156 ~ 55724271 (+)
LOC110530939 LOC106568914 other upstream 2046541 55457870 ~ 55461071 (+)
LOC110530153 LOC106568927 other upstream 2370030 55120291 ~ 55136638 (+)
G725878 NA other downstream 6446 57513606 ~ 57515394 (+)
G725907 LOC106581475 other downstream 47563 57554723 ~ 57555482 (+)
LOC118965533 NA other downstream 345852 57850799 ~ 57854417 (+)
G727161 NA other downstream 849879 58357039 ~ 58358245 (+)
G727348 NA other downstream 1139699 58646859 ~ 58674005 (+)

Expression


Co-expression Network