G725878


Basic Information

Item Value
gene id G725878
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 57513606 ~ 57515394 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU824624
CATTTAAATAGCTTTAATAAAGTGACAAACATACAAAGTAAAGTGATAAACAAGTGATAAAAATCATTCATACATATCCGGTTCAATGTACAATTCTGTCCCCTCAAATcataatacagtatacagtatacacaaaAGTGCACAAAGTGAACACATTTCCTCACTGTACACATTTGTTTTTACCGTATTGCACCCAGAATGTGTAACTGGATCAAAATAACATTTATTCAAAACAGATGGACCAAAGGAAAAGTTATTGATAGCTGTTGACTAAATGCAACCGACAGCTCTACACAAATCTAGTTCTAGTTGAAGTCGTTTTTTaaaaattttacccctttttctccccaaatgCGTGGTAtacaattgtttagtagctactatcttgtctcatcgctacaactcccgtacgggctcaacgaaggttgaaagtcatgcgtcctccgatacacgacccaaccaagccgcactgcttcttaagcgccatccaacccggaagccagccgcaccaatgtgtcggaggaaacactgtgcactgcgcccagcccgccacaggagacgCTGGTGAGCTATgggacaaggatttccctaccagccaaaccctccctaacccggacgacgctaggccaattgtgcgtcgccccagttacgacagagcctgggcgcgaacccaaggtctctggtggcacagctggtgctgcagtacagcgcccttaaccactgcgccacccgggaggcccagttACAGTAGTTTTTAGCTATCGAGCGTGAACAccTCTGTCTGTTTTGACATAGGCTGAAAAGCTAAGCCTGAAAGGCATAGGCACCGGTAGATAAGTGAGGAAATACAAAGGTGAGGAAATACACAATTATAAAGTGCATAAAACTGTCTTCATATTCTTTTCTTGTGGTTAACTAGGAACTACTTCAAGAGTTCAAGTCACACACACAACAGTAAGTTATACAAATTGGAATGTCACAGTTCCTGTCATATTATAAATATTTGGTAGGCTACAATCCTCCTGGGTCTATAGGAATGTGGCCTGTTGGAAGAAGGCCCAGGGAGAAAGGGGGACCAGAGAGTTGGACGGACAAGGGTacaaaagtttggggccacttaagaaatatccttgtttttgataaatttgctttttttttgtcccttaaaataacatcaaattgatcagaaatgcagtgtagacattcttaatgttgtaaatgactattggagctggaaattgataattttttaatggaatatctacataggcgcacagaggaccattatcagcaaccatcactcctgtgttccaatggcacgttgtgttagctaatcaaagttcataattttaaaaggctaatttatcattagaaaacccttttgcaattatgttagcacagctgaaaactgttgtgcttatTAAAGACGCAAtagaactggccttctttagactagttgagtatctggagcgtcagcatttttgggttcgattacaggctcaaaaatggccagaaacaaagacctttcttctgaaactcgtcactttattcttgttctgagaaatgaaggctattccatgtgagaaattgccaagaaactgaagatctcgtacaactcccttcacagaGCAGTCATCAGAGGTGGATGAGCGGAGGTGGGTTGAGTTTTAGAGGGCCTGGTAGTCTTTTCCTGATTGTGTTTCTGTGACATTCTGATAGTAGTGGACAAT
>TU824625
CATTTAAATAGCTTTAATAAAGTGACAAACATACAAAGTAAAGTGATAAACAAGTGATAAAAATCATTCATACATATCCGGTTCAATGTACAATTCTGTCCCCTCAAATcataatacagtatacagtatacacaaaAGTGCACAAAGTGAACACATTTCCTCACTGTACACATTTGTTTTTACCGTATTGCACCCAGAATGTGTAACTGGATCAAAATAACATTTATTCAAAACAGATGGACCCAAGGAAAAGTTATTGATAGCTGTTGACTAAATGCAACCGACAGCTCTACACAAATCTAGTTCTAGTTGAAGTCGTTTTTTaaaaattttacccctttttctccccaaatgCGTGGTAtacaattgtttagtagctactatcttgtctcatcgctacaactcccgtacgggctcaacgaaggttgaaagtcatgcgtcctccgatacacgacccaaccaagccgcactgcttcttaagcgccatccaacccggaagccagccgcaccaatgtgtcggaggaaacactgtgcactgcgcccagcccgccacaggagacgCTGGTGAGCTATgggacaaggatttccctaccagccaaaccctccctaacccggacgacgctaggccaattgtgcgtcgccccagttacgacagagcctgggcgcgaacccaaggtctctggtggcacagctggtgctgcagtacagcgcccttaaccactgcgccacccgggaggcccagttACAGTAGTTTTTAGCTATCGAGCGTGAACAccTCTGTCTGTTTTGACATAGGCTGAAAAGCTAAGCCTGAAAGGCATAGGCACCGGTAGATAAGTGAGGAAATACAAAGGTGAGGAAATACACAATTATAAAGTGCATAAAACTGTCTTCATATTCTTTTCTTGTGGTTAACTAGGAACTACTTCAAGAGTTCAAGTCACACACACAACAGTAAGTTATACAAATTGGAATGTCACAGTTCCTGTCATATTATAAATATTTGGTAGGCTACAATCCTCCTGGGTCTATAGGAATGTGGCCTGTTGGAAGAAGGCCCAGGGAGAAAGGGGGACCAGAGAGTTGGACGGACAAGGGTacaaaagtttggggccacttaagaaatatccttgtttttgataaatttgctttttttttgtcccttaaaataacatcaaattgatcagaaatgcagtgtagacattcttaatgttgtaaatgactattggagctggaaattgataattttttaatggaatatctacataggcgcacagaggaccattatcagcaaccatcactcctgtgttccaatggcacgttgtgttagctaatcaaagttcataattttaaaaggctaatttatcattagaaaacccttttgcaattatgttagcacagctgaaaactgttgtgcttatTAAAGACGCAAtagaactggccttctttagactagttgagtatctggagcgtcagcatttttgggttcgattacaggctcaaaaatggccagaaacaaagacctttcttctgaaactcgtcactttattcttgttctgagaaatgaaggctattccatgtgagaaattgccaagaaactgaagatctcgtacaactcccttcacagaGCAGTCATCAGAGGTGGATGAGCGGAGGTGGGTTGAGTTTTAGAGGGCCTGGTAGTCTTTTCCTGATTGTGTTTCTGTGACATTCTGATAGTAGTGGACAAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU824624 False 1730 TUCP 0.42 3 57513606 57515394
TU824625 True 1730 TUCP 0.42 3 57513606 57515394

Neighbor

gene id symbol gene type direction distance location
LOC110530213 LOC106568871 coding upstream 34751 57421244 ~ 57478855 (+)
car8 car8 coding upstream 151793 57339585 ~ 57361813 (+)
asph LOC106568874 coding upstream 383094 57108203 ~ 57130512 (+)
LOC110530207 ttpa coding upstream 426991 57081546 ~ 57086615 (+)
LOC110530206 LOC106599164 coding upstream 434161 57045780 ~ 57079445 (+)
LOC110530217 LOC106568867 coding downstream 42634 57558028 ~ 57572376 (+)
LOC110530216 LOC106568865 coding downstream 57257 57572651 ~ 57582193 (+)
eif4g1a NA coding downstream 82441 57597835 ~ 57625254 (+)
LOC118965660 NA coding downstream 107319 57622713 ~ 57622840 (+)
LOC118965680 NA coding downstream 107877 57623271 ~ 57623401 (+)
G725872 LOC106568870 non-coding upstream 6446 57506661 ~ 57507160 (+)
G725869 LOC106568870 non-coding upstream 10016 57500533 ~ 57503590 (+)
G725818 NA non-coding upstream 94929 57418357 ~ 57418677 (+)
G725809 NA non-coding upstream 105194 57408074 ~ 57408412 (+)
G725615 NA non-coding upstream 370905 57136832 ~ 57142701 (+)
G725886 NA non-coding downstream 9452 57524846 ~ 57529724 (+)
G725892 NA non-coding downstream 20844 57536238 ~ 57536464 (+)
G725895 NA non-coding downstream 23899 57539293 ~ 57539548 (+)
G725905 NA non-coding downstream 34396 57549790 ~ 57550018 (+)
G725906 LOC106590568 non-coding downstream 37444 57552838 ~ 57553144 (+)
G725573 NA other upstream 529321 56983570 ~ 56984285 (+)
si:ch211-267e7.3 LOC106568906 other upstream 1795369 55710156 ~ 55724271 (+)
LOC110530939 LOC106568914 other upstream 2053486 55457870 ~ 55461071 (+)
LOC110530153 LOC106568927 other upstream 2376975 55120291 ~ 55136638 (+)
G725907 LOC106581475 other downstream 39329 57554723 ~ 57555482 (+)
LOC118965533 NA other downstream 337618 57850799 ~ 57854417 (+)
G727161 NA other downstream 841645 58357039 ~ 58358245 (+)
G727348 NA other downstream 1131465 58646859 ~ 58674005 (+)
G728057 LOC100136012 other downstream 1465537 58980931 ~ 58981271 (+)

Expression


Co-expression Network