XLOC_026321 (eve1)


Basic Information

Item Value
gene id XLOC_026321
gene name eve1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 23641935 ~ 23643830 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00051329
GAACTTGGCTTGGAAGAGAAACAGTGACGAGAGAGAATTGCTATTTTTTTAGTAGGGCCTGGTTTGGGAGTGTTTTGAGGACTATGAGAAATTAGTGAAAATCAATTACAGGAGTATTTGGATTGCGGAAGTGGATCCTAACGACAAAATGCTAGCAGAGGACAGGGAGTCACCAGTGTCTACTGTTGCTCATGCTGACAGTGACCAAGGAGAGGAAGAATGCCCTCGTATTTCACTACTGAATGGTATCGACCAAAGTCGGCGGCACCGGACAGCTTTCACGAGGGAACAGCTGACTCGTCTTGAGCAAGAATACTGCAAAGAAAGTTACGTGTCTCGACCCAGGCGATGCGAACTGGCGGCAGCCCTTAACTTGCCCGAGACCACAATAAAGGTCTGGTTCCAGAACCGGAGAATGAAGGACAAGAGACAACGTCACAGTCTACACTGGCCAAATCCACTGGACCCGAACCTGTGTGCCTTCATGGTGGGTCAGACGGCTGCTGCTCTTCCCTACCCACTGCTGCCCCGCTTACCCATTCATCTATACTCTCATTTGGGCATGGGTAGTCTCTCTGGGTTTTCAACCCCCTACAGCGCCACCACAAGGCCAGTGGATACTTTGCACCTGCCTCCATCGACCTACCCCTGGTTAGGTGGTCTTCCACAACCAGCTCTCTATTCCCCCGTCCAGACAATGCATCATCCAGTAGGATGCCACTGTCCTCAATGCCTGCAATGGAGACCGGACCACCTGCTTAAACCTAGAGGGGGAGCTAGGACAGGCCTACAACCCCAAACCTTTGGCAGTGCTTCAGGATGATAGGACAGAAGCGTCTTTGCCATATTAAAAGCAATAGGCTACGCAGAAATGAAATTTGTTTATCGTTTACACTCCTGTGTCATTCCAGACCTGAATGACTAACTGACTTGTTCTCTCTGGGataagaaaaaatacattttgaagatGGTTTTGCCCATACACTGAAAGTTTAAAGCTGTTGTATTTATGCATCTGTAAACTTATTCAGAACTGGAAAAACATCAGGATTGAAGAGCTGTTTTGTTGTAATCTTTTTGTATTATAGTTAAAAGTTTTGCTTACTTTTCTAAACAAATAAGTTTGTTAATTTTTCATAATGACTGTTTTGCACCTGAACACTGATACAAACCCATGTACATATGCTTTCCAAAATATATATGACAATATGgactattaaaatatttatggaaacatttta
>TCONS_00051330
CGACCTGAAAGATGCAGAGGTGAGGGAGGAGGGGGGTGGACAGCGACTACAAAAACAACTCATCTTTCCTTTCATAAACGAACTTGGCTTGGAAGAGAAACAGTGACGAGAGAGAATTGCTATTTTTTTAGTAGGGCCTGGTTTGGGAGTGTTTTGAGGACTATGAGAAATTAGTGAAAATCAATTACAGGAGTATTTGGATTGCGGAAGTGGATCCTAACGACAAAATGCCAGAGGACAGGGAGTCACCAGTGTCTACTGTTGCTCATGCTGACAGTGACCAAGGAGAGGAAGAATGCCCTCGTATTTCACTACTGAATGGTATCGACCAAAGTCGGCGGCACCGGACAGCTTTCACGAGGGAACAGCTGACTCGTCTTGAGCAAGAATACTGCAAAGAAAGTTACGTGTCTCGACCCAGGCGATGCGAACTGGCGGCAGCCCTTAACTTGCCCGAGACCACAATAAAGGTCTGGTTCCAGAACCGGAGAATGAAGGACAAGAGACAACGTCACAGTCTACACTGGCCAAATCCACTGGACCCGAACCTGTGTGCCTTCATGGTGGGTCAGACGGCTGCTGCTCTTCCCTACCCACTGCTGCCCCGCTTACCCATTCATCTATACTCTCATTTGGGCATGGGTAGTCTCTCTGGGTTTTCAACCCCCTACAGCGCCACCACAAGGCCAGTGGATACTTTGCACCTGCCTCCATCGACCTACCCCTGGTTAGGTGGTCTTCCACAACCAGCTCTCTATTCCCCCGTCCAGACAATGCATCATCCAGTAGGATGCCACTGTCCTCAATGCCTGCAATGGAGACCGGACCACCTGCTTAAACCTAGAGGGGGAGCTAGGACAGGCCTACAACCCCAAACCTTTGGCAGTGCTTCAGGATGATAGGACAGAAGCGTCTTTGCCATATTAAAAGCAATAGGCTACGCAGAAATGAAATTTGTTTATCGTTTACACTCCTGTGTCATTCCAGACCTGAATGACTAACTGACTTGTTCTCTCTGGGataagaaaaaatacattttgaagatGGTTTTGCCCATACACTGAAAGTTTAAAGCTGTTGTATTTATGCATCTGTAAACTTATTCAGAACTGGAAAAACATCAGGATTGAAGAGCTGTTTTGTTGTAATCTTTTTGTATTATAGTTAAAAGTTTTGCTTACTTTTCTAAACAAATAAGTTTGTTAATTTTTCATAATGACTGTTTTGCACCTGAACACTGATACAAACCCATGTACATATGCTTTCCAAAATATATATGACAATATGgactattaaaatatttatggaaacatt

Function

symbol description
eve1 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within dorsal/ventral pattern formation; post-anal tail morphogenesis; and regulation of mesodermal cell fate specification. Predicted to be active in nucleus. Is expressed in several structures, including blastoderm; germ ring; mesoderm; pharyngeal arch 3-7; and presumptive mesoderm.

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0036342 post-anal tail morphogenesis biological_process
GO:0009953 dorsal/ventral pattern formation biological_process
GO:0007389 pattern specification process biological_process
GO:0042661 regulation of mesodermal cell fate specification biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003677 DNA binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-980526-69 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within dorsal/ventral pattern formation; post-anal tail morphogenesis; and regulation of mesodermal cell fate specification. Predicted to be active in nucleus. Is expressed in several structures, including blastoderm; germ ring; mesoderm; pharyngeal arch 3-7; and presumptive mesoderm.

Ensembl:

ensembl_id ENSDARG00000056012

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00051329 False 1241 mRNA 0.45 3 23641935 23643751
TCONS_00051330 True 1314 mRNA 0.45 3 23641938 23643830

Neighbor

gene id symbol gene type direction distance location
XLOC_026320 atp5mc1 coding downstream 37539 23599290 ~ 23604396 (-)
XLOC_026319 ube2z coding downstream 45095 23581614 ~ 23596840 (-)
XLOC_026318 igf2bp1 coding downstream 66820 23518137 ~ 23575115 (-)
XLOC_026317 si:dkey-225f5.4 coding downstream 128780 23498437 ~ 23513155 (-)
XLOC_026316 msl1a coding downstream 167519 23462819 ~ 23474416 (-)
XLOC_026322 NA coding upstream 19314 23663144 ~ 24050854 (-)
XLOC_026323 BX927395.1 coding upstream 42368 23686198 ~ 23688287 (-)
XLOC_026324 NA coding upstream 96521 23740351 ~ 23744279 (-)
XLOC_026325 CR751227.3 coding upstream 174092 23817922 ~ 23818046 (-)
XLOC_026326 nfe2l1a coding upstream 428890 24072720 ~ 24093144 (-)
XLOC_026314 CU459159.1 non-coding downstream 259327 23382492 ~ 23382608 (-)
XLOC_026312 NA non-coding downstream 314382 23323244 ~ 23327553 (-)
XLOC_026311 NA non-coding downstream 401214 23220270 ~ 23240721 (-)
XLOC_026310 NA non-coding downstream 572299 23039508 ~ 23069636 (-)
XLOC_026308 NA non-coding downstream 1220012 22408790 ~ 22421923 (-)
XLOC_026329 CR790377.1 non-coding upstream 759319 24403149 ~ 24403269 (-)

Expression


Co-expression Network