G725906 (LOC106590568)


Basic Information

Item Value
gene id G725906
gene name LOC106590568
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 57552838 ~ 57553144 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU824654
TGGAATTAGCCCTGTTTTTGCAAGAGCACCAAAATTGTCATGCAAATTGCTTCAAAAATTATGAGTTCATTCTCATTTTAGCGTACATGTCTGATATCTTCGCAGCTCTCAATCATCTCAATCAAAAGATGCAGGGCGGTGGAGTCAACATCATCGAAGCGAAGGAAAACATGAAGGCTTTTCAAAAAAAGCTACCGTTATGGAAACGACGAACAGAGAACGATAACTTCGCAAACTTACCCCTGCTGGACGACTGTGTAAGTAAGATCGAAGATGTATCTGGAATCGGAGACATTTCTGTACCCGC

Function

NR:

description
PREDICTED: protein ZBED8-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU824654 True 307 lncRNA 0.42 1 57552838 57553144

Neighbor

gene id symbol gene type direction distance location
LOC110530213 LOC106568871 coding upstream 73983 57421244 ~ 57478855 (+)
car8 car8 coding upstream 191025 57339585 ~ 57361813 (+)
asph LOC106568874 coding upstream 422326 57108203 ~ 57130512 (+)
LOC110530207 ttpa coding upstream 466223 57081546 ~ 57086615 (+)
LOC110530206 LOC106599164 coding upstream 473393 57045780 ~ 57079445 (+)
LOC110530217 LOC106568867 coding downstream 4884 57558028 ~ 57572376 (+)
LOC110530216 LOC106568865 coding downstream 19507 57572651 ~ 57582193 (+)
eif4g1a NA coding downstream 44691 57597835 ~ 57625254 (+)
LOC118965660 NA coding downstream 69569 57622713 ~ 57622840 (+)
LOC118965680 NA coding downstream 70127 57623271 ~ 57623401 (+)
G725905 NA non-coding upstream 2820 57549790 ~ 57550018 (+)
G725895 NA non-coding upstream 13290 57539293 ~ 57539548 (+)
G725892 NA non-coding upstream 16374 57536238 ~ 57536464 (+)
G725886 NA non-coding upstream 23114 57524846 ~ 57529724 (+)
G725872 LOC106568870 non-coding upstream 45678 57506661 ~ 57507160 (+)
G725912 NA non-coding downstream 31115 57584259 ~ 57584527 (+)
G725949 NA non-coding downstream 124707 57677851 ~ 57678662 (+)
G725969 NA non-coding downstream 169700 57722844 ~ 57723061 (+)
G725878 NA other upstream 37444 57513606 ~ 57515394 (+)
G725573 NA other upstream 568553 56983570 ~ 56984285 (+)
si:ch211-267e7.3 LOC106568906 other upstream 1834601 55710156 ~ 55724271 (+)
LOC110530939 LOC106568914 other upstream 2092718 55457870 ~ 55461071 (+)
G725907 LOC106581475 other downstream 1579 57554723 ~ 57555482 (+)
LOC118965533 NA other downstream 299868 57850799 ~ 57854417 (+)
G727161 NA other downstream 803895 58357039 ~ 58358245 (+)
G727348 NA other downstream 1093715 58646859 ~ 58674005 (+)
G728057 LOC100136012 other downstream 1427787 58980931 ~ 58981271 (+)

Expression


Co-expression Network