G727987


Basic Information

Item Value
gene id G727987
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 58923730 ~ 58923983 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU826936
gtgtaaggactatttgaccaagatgcagagtgatggagtgtggcatcagatgacctggcctccacaatcacccaacctcaacccaattgagatggtttgggatatgttggaccgcagagtgaaggaaaagcagccaacaagtgctcagcatacgtgggaactccttcaagactgttggaaaagcattcctcataaagctgatcgagagaatgccaagacggtgcgaagttgtcatcaaggcaaaggttggatac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU826936 True 254 lncRNA 0.48 1 58923730 58923983

Neighbor

gene id symbol gene type direction distance location
LOC118965657 NA coding upstream 251055 58672567 ~ 58672675 (+)
LOC110530233 LOC106599529 coding upstream 273752 58335194 ~ 58649978 (+)
LOC110530232 LOC106568852 coding upstream 655347 58165647 ~ 58268703 (+)
LOC110530231 LOC106568853 coding upstream 787552 57932295 ~ 58136178 (+)
trnag-ucc-2 NA coding upstream 995284 57928375 ~ 57928446 (+)
LOC110530235 LOC100136455 coding downstream 133433 59057416 ~ 59084854 (+)
LOC110530237 LOC106568845 coding downstream 264084 59188067 ~ 59211817 (+)
LOC110530248 crem coding downstream 824685 59748668 ~ 59768093 (+)
LOC110530249 LOC106568835 coding downstream 851747 59775730 ~ 59825064 (+)
LOC110530251 LOC106568834 coding downstream 901314 59825297 ~ 59828412 (+)
G727973 NA non-coding upstream 11363 58912155 ~ 58912367 (+)
G727338 NA non-coding upstream 274214 58629167 ~ 58649516 (+)
G727265 NA non-coding upstream 408866 58508837 ~ 58514864 (+)
G727266 NA non-coding upstream 409759 58511905 ~ 58513971 (+)
G727161 NA non-coding upstream 565485 58357039 ~ 58358245 (+)
G728059 NA non-coding downstream 57421 58981404 ~ 58981618 (+)
G728232 NA non-coding downstream 187179 59111162 ~ 59112437 (+)
G728281 NA non-coding downstream 257036 59181019 ~ 59181305 (+)
G728284 NA non-coding downstream 259711 59183694 ~ 59183964 (+)
G728297 NA non-coding downstream 295164 59219147 ~ 59219847 (+)
G727348 NA other upstream 249725 58646859 ~ 58674005 (+)
LOC118965533 NA other upstream 1070098 57850799 ~ 57854417 (+)
G725907 LOC106581475 other upstream 1368248 57554723 ~ 57555482 (+)
G725878 NA other upstream 1408336 57513606 ~ 57515394 (+)
G728057 LOC100136012 other downstream 56948 58980931 ~ 58981271 (+)
G730206 NA other downstream 2116585 61040568 ~ 61042129 (+)
G730267 NA other downstream 2234827 61158810 ~ 61159193 (+)
G730377 NA other downstream 2446044 61370027 ~ 61810354 (+)

Expression


Co-expression Network