G728059


Basic Information

Item Value
gene id G728059
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 58981404 ~ 58981618 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU827011
gaatgctacctatgaccccaagaacactatCCCACCATCAAAAatagaggtggaaacattatgctttgggggtgtttttctgctaaggggacaggacacttcaccgcatcaaagggacgatgggcggggccatgtaccatcaaatcttgggttagaacctccttccctcagccagggcactgaaaatgggtcgtggatgggtattccagcatgac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU827011 True 215 lncRNA 0.50 1 58981404 58981618

Neighbor

gene id symbol gene type direction distance location
LOC118965657 NA coding upstream 308729 58672567 ~ 58672675 (+)
LOC110530233 LOC106599529 coding upstream 331426 58335194 ~ 58649978 (+)
LOC110530232 LOC106568852 coding upstream 713021 58165647 ~ 58268703 (+)
LOC110530231 LOC106568853 coding upstream 845226 57932295 ~ 58136178 (+)
trnag-ucc-2 NA coding upstream 1052958 57928375 ~ 57928446 (+)
LOC110530235 LOC100136455 coding downstream 75798 59057416 ~ 59084854 (+)
LOC110530237 LOC106568845 coding downstream 206449 59188067 ~ 59211817 (+)
LOC110530248 crem coding downstream 767050 59748668 ~ 59768093 (+)
LOC110530249 LOC106568835 coding downstream 794112 59775730 ~ 59825064 (+)
LOC110530251 LOC106568834 coding downstream 843679 59825297 ~ 59828412 (+)
G727987 NA non-coding upstream 57421 58923730 ~ 58923983 (+)
G727973 NA non-coding upstream 69037 58912155 ~ 58912367 (+)
G727338 NA non-coding upstream 331888 58629167 ~ 58649516 (+)
G727265 NA non-coding upstream 466540 58508837 ~ 58514864 (+)
G727266 NA non-coding upstream 467433 58511905 ~ 58513971 (+)
G728232 NA non-coding downstream 129544 59111162 ~ 59112437 (+)
G728281 NA non-coding downstream 199401 59181019 ~ 59181305 (+)
G728284 NA non-coding downstream 202076 59183694 ~ 59183964 (+)
G728297 NA non-coding downstream 237529 59219147 ~ 59219847 (+)
G728300 LOC106568844 non-coding downstream 272798 59254416 ~ 59257007 (+)
G728057 LOC100136012 other upstream 133 58980931 ~ 58981271 (+)
G727348 NA other upstream 307399 58646859 ~ 58674005 (+)
G727161 NA other upstream 623269 58357039 ~ 58358245 (+)
LOC118965533 NA other upstream 1127772 57850799 ~ 57854417 (+)
G725907 LOC106581475 other upstream 1425922 57554723 ~ 57555482 (+)
G730206 NA other downstream 2058950 61040568 ~ 61042129 (+)
G730267 NA other downstream 2177192 61158810 ~ 61159193 (+)
G730377 NA other downstream 2388409 61370027 ~ 61810354 (+)
G730425 NA other downstream 2448245 61429863 ~ 61468746 (+)

Expression


Co-expression Network