G728232


Basic Information

Item Value
gene id G728232
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 59111162 ~ 59112437 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU827196
TGCATTTGACACGAGACATATTAAAACACAAATCATCTTATGCAGTCATAAATGAAAATGATATATGTTTACAAAAGAAACAAGGCAGAAAAATAAAGGTTTGATTTCCACACAACTGAATGCTGTGATCAGGGATACTAACAGAGAAGAGGTGGACTGAATAAATACTAAATGAATGAGAGTGGTATGTTTTACCAGGTCCAATTTACATTTGATTGGACTGTGACTGGTagcctgggcctgtattcacaaagtgtaTCGGAGTAGGAATGCTGTTTTGCCATTTTGATCATAACTAATATGATTatatggacaggagggacctgatcctagatcagtactcctgCTCAGAGATACTTTCTGAATATAGGCCATGGTCCTACTCCGATTTCTGCTCAAATCTCCCATTGAAATCAATGCAAGGTTTATGCAAAAGTCCAAGCTACCTGTACGTGCACAGATCTTGTGTCAGGATGATTCTCGCTTCAAAGTGATCCGTGCAACCCAGCTACCATTGTTTTTGCTCAAAACAATATGGATTACAAAAAGGATGTAGTCAGTTAATTGAGGAGATTGTTATACAGGGATGTGTCAATTCATTTCATCTGAGGTTTGAATGTATTGCACTTCTTTGGGTTGCAGCAGCTTCCATCTACTACagtatatttctctctctatcatcctAGTTGGGTGAAAGACTGTCCAGACCTTCACTGTCCAGACCTACAGTACATATGCTTAGAGTCATTTTTACAAATCAAATTGATGGCAGTTTTTCTTCTCCTGATAGAACACATTTAATTTCCCCAAATCATATCAAATAATACAAAGTCTCAGCACGCAGTATTCCCCAAAGACATTGTGAGTGTCTTTACATAGAGCATTGTGGCTGAGTGAGCGGTGTGCCTATTGCAGGTCCATACATCATCCTTATGCCTCGGGATTGTGCTCTAAAACCTTATTTTCCTCCCTTCATCACAATATACCCTGAAAGCACATCCATGGAAGGAAAACTGTTTACCCagtcctctcccactctctgccaCTTATTACAAATCAAACGCAGAGTGTTGAATGAGTGAATGTGGTTTTTTGTTGGGGTTTAATTCACtcctttttttttgtttatcctcttcttctccttctctccatttaTTTTTCTCGTCAAGCATGGAGAGCGAGGCGTGCTTGGTTTTCGGAGCATGAAGTGAAGCGCGAGCGGGGCGAGTGCCAGGTAACTAGAGAGGGCTTCCCCTTTGGTCCTGATTATCCCATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU827196 True 1276 lncRNA 0.41 1 59111162 59112437

Neighbor

gene id symbol gene type direction distance location
LOC110530235 LOC100136455 coding upstream 26308 59057416 ~ 59084854 (+)
LOC118965657 NA coding upstream 438487 58672567 ~ 58672675 (+)
LOC110530233 LOC106599529 coding upstream 461184 58335194 ~ 58649978 (+)
LOC110530232 LOC106568852 coding upstream 842779 58165647 ~ 58268703 (+)
LOC110530231 LOC106568853 coding upstream 974984 57932295 ~ 58136178 (+)
LOC110530237 LOC106568845 coding downstream 75630 59188067 ~ 59211817 (+)
LOC110530248 crem coding downstream 636231 59748668 ~ 59768093 (+)
LOC110530249 LOC106568835 coding downstream 663293 59775730 ~ 59825064 (+)
LOC110530251 LOC106568834 coding downstream 712860 59825297 ~ 59828412 (+)
LOC110530253 LOC106568832 coding downstream 959696 60072133 ~ 60077499 (+)
G728059 NA non-coding upstream 129544 58981404 ~ 58981618 (+)
G727987 NA non-coding upstream 187179 58923730 ~ 58923983 (+)
G727973 NA non-coding upstream 198795 58912155 ~ 58912367 (+)
G727338 NA non-coding upstream 461646 58629167 ~ 58649516 (+)
G727265 NA non-coding upstream 596298 58508837 ~ 58514864 (+)
G728281 NA non-coding downstream 68582 59181019 ~ 59181305 (+)
G728284 NA non-coding downstream 71257 59183694 ~ 59183964 (+)
G728297 NA non-coding downstream 106710 59219147 ~ 59219847 (+)
G728300 LOC106568844 non-coding downstream 141979 59254416 ~ 59257007 (+)
G728329 NA non-coding downstream 172292 59284729 ~ 59284967 (+)
G728057 LOC100136012 other upstream 129891 58980931 ~ 58981271 (+)
G727348 NA other upstream 437157 58646859 ~ 58674005 (+)
G727161 NA other upstream 753027 58357039 ~ 58358245 (+)
LOC118965533 NA other upstream 1257530 57850799 ~ 57854417 (+)
G725907 LOC106581475 other upstream 1555680 57554723 ~ 57555482 (+)
G730206 NA other downstream 1928131 61040568 ~ 61042129 (+)
G730267 NA other downstream 2046373 61158810 ~ 61159193 (+)
G730377 NA other downstream 2257590 61370027 ~ 61810354 (+)
G730425 NA other downstream 2317426 61429863 ~ 61468746 (+)

Expression


Co-expression Network