G728284


Basic Information

Item Value
gene id G728284
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 59183694 ~ 59183964 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU827257
AAAGCATTCTCTTTAAAAGGAAACAGCAGGAGGCTTGAGAGTATAGTTATTTTGGGCTGTTTTTGCTAATTTaaatacaacttttactttaTGCCTTGTctttcattacattttgaatgcttagcaggacaggaaaattgtcaaattcatgctcttatcaagagaacatccccggtcatccctatTGACTCTGATCTGCCGGATTCTAAACatatgtaaatgatgtctgagtgttggagtgtgcccctgtctaTCCGTAAATTAATAAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU827257 True 271 lncRNA 0.37 1 59183694 59183964

Neighbor

gene id symbol gene type direction distance location
LOC110530235 LOC100136455 coding upstream 98840 59057416 ~ 59084854 (+)
LOC118965657 NA coding upstream 511019 58672567 ~ 58672675 (+)
LOC110530233 LOC106599529 coding upstream 533716 58335194 ~ 58649978 (+)
LOC110530232 LOC106568852 coding upstream 915311 58165647 ~ 58268703 (+)
LOC110530231 LOC106568853 coding upstream 1047516 57932295 ~ 58136178 (+)
LOC110530237 LOC106568845 coding downstream 4103 59188067 ~ 59211817 (+)
LOC110530248 crem coding downstream 564704 59748668 ~ 59768093 (+)
LOC110530249 LOC106568835 coding downstream 591766 59775730 ~ 59825064 (+)
LOC110530251 LOC106568834 coding downstream 641333 59825297 ~ 59828412 (+)
LOC110530253 LOC106568832 coding downstream 888169 60072133 ~ 60077499 (+)
G728281 NA non-coding upstream 2389 59181019 ~ 59181305 (+)
G728232 NA non-coding upstream 71257 59111162 ~ 59112437 (+)
G728059 NA non-coding upstream 202076 58981404 ~ 58981618 (+)
G727987 NA non-coding upstream 259711 58923730 ~ 58923983 (+)
G727973 NA non-coding upstream 271327 58912155 ~ 58912367 (+)
G728297 NA non-coding downstream 35183 59219147 ~ 59219847 (+)
G728300 LOC106568844 non-coding downstream 70452 59254416 ~ 59257007 (+)
G728329 NA non-coding downstream 100765 59284729 ~ 59284967 (+)
G728330 NA non-coding downstream 108515 59292479 ~ 59292697 (+)
G728250 LOC106568842 non-coding downstream 109590 59293554 ~ 59293847 (+)
G728057 LOC100136012 other upstream 202423 58980931 ~ 58981271 (+)
G727348 NA other upstream 509689 58646859 ~ 58674005 (+)
G727161 NA other upstream 825559 58357039 ~ 58358245 (+)
LOC118965533 NA other upstream 1330062 57850799 ~ 57854417 (+)
G725907 LOC106581475 other upstream 1628212 57554723 ~ 57555482 (+)
G730206 NA other downstream 1856604 61040568 ~ 61042129 (+)
G730267 NA other downstream 1974846 61158810 ~ 61159193 (+)
G730377 NA other downstream 2186063 61370027 ~ 61810354 (+)
G730425 NA other downstream 2245899 61429863 ~ 61468746 (+)

Expression


Co-expression Network