G728250 (LOC106568842)


Basic Information

Item Value
gene id G728250
gene name LOC106568842
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 59293554 ~ 59293847 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU827222
GTTAGAGTGGGGCACCAGCACTCGTCCCTCCCTCCATCGGCTGCCCTGGTGTCCACTGACAGTCCAGAGCAGTGCCTCAGTccgtccctcctctgtctccctgctcTGTTTGATGTGCAGGGTGCCGGCGTGCTCCCCGAACATGTGGTACCAGaaggacacacacaggtctgCATCAGGGGCGGTGACGGGCAGGCTGGCTAGGCGtgccaccctctcctccatcctctcctcctctgactcctcctccttcctttcgGTCTCAGTAGCCAGCAGCATGTAGATGAAATTTCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU827222 True 294 lncRNA 0.61 1 59293554 59293847

Neighbor

gene id symbol gene type direction distance location
LOC110530237 LOC106568845 coding upstream 81737 59188067 ~ 59211817 (+)
LOC110530235 LOC100136455 coding upstream 208700 59057416 ~ 59084854 (+)
LOC118965657 NA coding upstream 620879 58672567 ~ 58672675 (+)
LOC110530233 LOC106599529 coding upstream 643576 58335194 ~ 58649978 (+)
LOC110530232 LOC106568852 coding upstream 1025171 58165647 ~ 58268703 (+)
LOC110530248 crem coding downstream 454821 59748668 ~ 59768093 (+)
LOC110530249 LOC106568835 coding downstream 481883 59775730 ~ 59825064 (+)
LOC110530251 LOC106568834 coding downstream 531450 59825297 ~ 59828412 (+)
LOC110530253 LOC106568832 coding downstream 778286 60072133 ~ 60077499 (+)
LOC110530254 LOC106568831 coding downstream 862495 60156342 ~ 60168950 (+)
G728330 NA non-coding upstream 857 59292479 ~ 59292697 (+)
G728329 NA non-coding upstream 8587 59284729 ~ 59284967 (+)
G728300 LOC106568844 non-coding upstream 36547 59254416 ~ 59257007 (+)
G728297 NA non-coding upstream 73707 59219147 ~ 59219847 (+)
G728284 NA non-coding upstream 109590 59183694 ~ 59183964 (+)
G728253 LOC106568842 non-coding downstream 4670 59298517 ~ 59298736 (+)
G728334 NA non-coding downstream 18268 59312115 ~ 59312370 (+)
G728338 NA non-coding downstream 24046 59317893 ~ 59318104 (+)
G728339 NA non-coding downstream 24945 59318792 ~ 59319125 (+)
G728366 NA non-coding downstream 64968 59358815 ~ 59359360 (+)
G728057 LOC100136012 other upstream 312283 58980931 ~ 58981271 (+)
G727348 NA other upstream 619549 58646859 ~ 58674005 (+)
G727161 NA other upstream 935419 58357039 ~ 58358245 (+)
LOC118965533 NA other upstream 1439922 57850799 ~ 57854417 (+)
G725907 LOC106581475 other upstream 1738072 57554723 ~ 57555482 (+)
G730206 NA other downstream 1746721 61040568 ~ 61042129 (+)
G730267 NA other downstream 1864963 61158810 ~ 61159193 (+)
G730377 NA other downstream 2076180 61370027 ~ 61810354 (+)
G730425 NA other downstream 2136016 61429863 ~ 61468746 (+)

Expression


Co-expression Network