G728339


Basic Information

Item Value
gene id G728339
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 59318792 ~ 59319125 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU827313
atCCATAGCTTCCAAAATCTTTTTCACAATGGAGAGGGAGAACCAACATGGAGACACAGTGGCTTCAAAACAGTGTTCGCTGTATATTATgcacattatgaacacctgctcattccatgacatagactgaccaggtgaatccaggtgaaagctatgatcccttattgatgtcacttgttaaatccacatcaatcagtctagatgaaggggaggagacatgttaaaaaaagtattttaagccttgagacaattgagacatggattgtgtatgtgtgccattcagaaggcgaatgggcaagacaaaatatttaagtacgtttgaacagggtatggt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU827313 True 334 lncRNA 0.40 1 59318792 59319125

Neighbor

gene id symbol gene type direction distance location
LOC110530237 LOC106568845 coding upstream 106975 59188067 ~ 59211817 (+)
LOC110530235 LOC100136455 coding upstream 233938 59057416 ~ 59084854 (+)
LOC118965657 NA coding upstream 646117 58672567 ~ 58672675 (+)
LOC110530233 LOC106599529 coding upstream 668814 58335194 ~ 58649978 (+)
LOC110530232 LOC106568852 coding upstream 1050409 58165647 ~ 58268703 (+)
LOC110530248 crem coding downstream 429543 59748668 ~ 59768093 (+)
LOC110530249 LOC106568835 coding downstream 456605 59775730 ~ 59825064 (+)
LOC110530251 LOC106568834 coding downstream 506172 59825297 ~ 59828412 (+)
LOC110530253 LOC106568832 coding downstream 753008 60072133 ~ 60077499 (+)
LOC110530254 LOC106568831 coding downstream 837217 60156342 ~ 60168950 (+)
G728338 NA non-coding upstream 688 59317893 ~ 59318104 (+)
G728334 NA non-coding upstream 6422 59312115 ~ 59312370 (+)
G728253 LOC106568842 non-coding upstream 20056 59298517 ~ 59298736 (+)
G728250 LOC106568842 non-coding upstream 24945 59293554 ~ 59293847 (+)
G728330 NA non-coding upstream 26095 59292479 ~ 59292697 (+)
G728366 NA non-coding downstream 39690 59358815 ~ 59359360 (+)
G728483 LOC106568841 non-coding downstream 213398 59532523 ~ 59532888 (+)
G728516 NA non-coding downstream 270283 59589408 ~ 59589632 (+)
G728564 NA non-coding downstream 335906 59655031 ~ 59655254 (+)
G728565 NA non-coding downstream 338082 59657207 ~ 59657448 (+)
G728057 LOC100136012 other upstream 337521 58980931 ~ 58981271 (+)
G727348 NA other upstream 644787 58646859 ~ 58674005 (+)
G727161 NA other upstream 960657 58357039 ~ 58358245 (+)
LOC118965533 NA other upstream 1465160 57850799 ~ 57854417 (+)
G725907 LOC106581475 other upstream 1763310 57554723 ~ 57555482 (+)
G730206 NA other downstream 1721443 61040568 ~ 61042129 (+)
G730267 NA other downstream 1839685 61158810 ~ 61159193 (+)
G730377 NA other downstream 2050902 61370027 ~ 61810354 (+)
G730425 NA other downstream 2110738 61429863 ~ 61468746 (+)

Expression


Co-expression Network