G728516


Basic Information

Item Value
gene id G728516
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 59589408 ~ 59589632 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU827500
ggaggagagaggactggaggacGTTGACAAATGCTGCCTGGAATGGGACTCAATTTACGCAGCGACCTCTCCTCCAGGAGACCAAGTCTGACACTAAAGGCGTCCGCATGCCTCCCAGCCTAAACACTTtgtgcatatactgtattctgatgacattgtgacgtttttgttcgttttggacTATAAGGGTTTTTTTCAGCTTTTCGGGCAAAAATTTTTTCTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU827500 True 225 lncRNA 0.46 1 59589408 59589632

Neighbor

gene id symbol gene type direction distance location
LOC110530237 LOC106568845 coding upstream 377591 59188067 ~ 59211817 (+)
LOC110530235 LOC100136455 coding upstream 504554 59057416 ~ 59084854 (+)
LOC118965657 NA coding upstream 916733 58672567 ~ 58672675 (+)
LOC110530233 LOC106599529 coding upstream 939430 58335194 ~ 58649978 (+)
LOC110530232 LOC106568852 coding upstream 1321025 58165647 ~ 58268703 (+)
LOC110530248 crem coding downstream 159036 59748668 ~ 59768093 (+)
LOC110530249 LOC106568835 coding downstream 186098 59775730 ~ 59825064 (+)
LOC110530251 LOC106568834 coding downstream 235665 59825297 ~ 59828412 (+)
LOC110530253 LOC106568832 coding downstream 482501 60072133 ~ 60077499 (+)
LOC110530254 LOC106568831 coding downstream 566710 60156342 ~ 60168950 (+)
G728483 LOC106568841 non-coding upstream 56520 59532523 ~ 59532888 (+)
G728366 NA non-coding upstream 230048 59358815 ~ 59359360 (+)
G728339 NA non-coding upstream 270283 59318792 ~ 59319125 (+)
G728338 NA non-coding upstream 271304 59317893 ~ 59318104 (+)
G728334 NA non-coding upstream 277038 59312115 ~ 59312370 (+)
G728564 NA non-coding downstream 65399 59655031 ~ 59655254 (+)
G728565 NA non-coding downstream 67575 59657207 ~ 59657448 (+)
G728570 NA non-coding downstream 73836 59663468 ~ 59663689 (+)
G728575 NA non-coding downstream 78279 59667911 ~ 59668446 (+)
G728580 NA non-coding downstream 87304 59676936 ~ 59720550 (+)
G728057 LOC100136012 other upstream 608137 58980931 ~ 58981271 (+)
G727348 NA other upstream 915403 58646859 ~ 58674005 (+)
G727161 NA other upstream 1231273 58357039 ~ 58358245 (+)
LOC118965533 NA other upstream 1735776 57850799 ~ 57854417 (+)
G725907 LOC106581475 other upstream 2033926 57554723 ~ 57555482 (+)
G730206 NA other downstream 1450936 61040568 ~ 61042129 (+)
G730267 NA other downstream 1569178 61158810 ~ 61159193 (+)
G730377 NA other downstream 1780395 61370027 ~ 61810354 (+)
G730425 NA other downstream 1840231 61429863 ~ 61468746 (+)

Expression


Co-expression Network