G728570


Basic Information

Item Value
gene id G728570
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 59663468 ~ 59663689 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU827554
cacacagtctcctctgaacagttgatgttgagatgtgtctgtagggttgcaaagggtcggaaactttccggtaaatttccCGGAagttttccatgggaagttaaccCTGGGAATTTGGGGGATTTTGCctaaattcattttttaaaaaaagttaGCTGaaaacagtgaaccttttttgtgggagaCACATGGCAATTCTAGGTCATGtagcatattttggtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU827554 True 222 lncRNA 0.41 1 59663468 59663689

Neighbor

gene id symbol gene type direction distance location
LOC110530237 LOC106568845 coding upstream 451651 59188067 ~ 59211817 (+)
LOC110530235 LOC100136455 coding upstream 578614 59057416 ~ 59084854 (+)
LOC118965657 NA coding upstream 990793 58672567 ~ 58672675 (+)
LOC110530233 LOC106599529 coding upstream 1013490 58335194 ~ 58649978 (+)
LOC110530232 LOC106568852 coding upstream 1395085 58165647 ~ 58268703 (+)
LOC110530248 crem coding downstream 84979 59748668 ~ 59768093 (+)
LOC110530249 LOC106568835 coding downstream 112041 59775730 ~ 59825064 (+)
LOC110530251 LOC106568834 coding downstream 161608 59825297 ~ 59828412 (+)
LOC110530253 LOC106568832 coding downstream 408444 60072133 ~ 60077499 (+)
LOC110530254 LOC106568831 coding downstream 492653 60156342 ~ 60168950 (+)
G728565 NA non-coding upstream 6020 59657207 ~ 59657448 (+)
G728564 NA non-coding upstream 8214 59655031 ~ 59655254 (+)
G728516 NA non-coding upstream 73836 59589408 ~ 59589632 (+)
G728483 LOC106568841 non-coding upstream 130580 59532523 ~ 59532888 (+)
G728366 NA non-coding upstream 304108 59358815 ~ 59359360 (+)
G728575 NA non-coding downstream 4222 59667911 ~ 59668446 (+)
G728580 NA non-coding downstream 13247 59676936 ~ 59720550 (+)
G728584 NA non-coding downstream 18348 59682037 ~ 59734333 (+)
G728583 NA non-coding downstream 25794 59689483 ~ 59734536 (+)
G728582 NA non-coding downstream 36448 59700137 ~ 59708468 (+)
G728057 LOC100136012 other upstream 682197 58980931 ~ 58981271 (+)
G727348 NA other upstream 989463 58646859 ~ 58674005 (+)
G727161 NA other upstream 1305333 58357039 ~ 58358245 (+)
LOC118965533 NA other upstream 1809836 57850799 ~ 57854417 (+)
G725907 LOC106581475 other upstream 2107986 57554723 ~ 57555482 (+)
G730206 NA other downstream 1376879 61040568 ~ 61042129 (+)
G730267 NA other downstream 1495121 61158810 ~ 61159193 (+)
G730377 NA other downstream 1706338 61370027 ~ 61810354 (+)
G730425 NA other downstream 1766174 61429863 ~ 61468746 (+)

Expression


Co-expression Network