G728582


Basic Information

Item Value
gene id G728582
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 59700137 ~ 59708468 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU827584
ACACACGTCGCACACGTTCTGGCAAAAGACACAGTAAAATGGGTAATAAACTACTAAAGGGGCCCTATAAAAAAAGCTGTGATTTTAAACCCCAAATTACAGCCATTTTCATAAATGTTCTCAGTTCAATTTCCTGGTTTGCCACTCAATTACAATTGGTAATGGAGAACAAAATGTAATGTTCTGAGTCCATGGCAGtgcttaaatcacatcagaaTACCATTTATTTTATGTCTGGAAGAAAAGTAACACATGAGAAAGCAATGCGTGGTCGAATGTGCCAGTCTAGCAATGGTTCTGTATTGCCAATTGCTGCTCATTTCATGGCAAGGTTTGCAAATAACAATAGATACAATTTCTATACTTTTGACAAGTATACCTTGCAGTTAATACTTAGTCGTGAAAGAATCTGGCAACCCACTAGGCATCAACTGGCTACACAGGGAGTGAGCGACAGACAgggcaatattgctggaaattaattggCAGATATGGTTTTAAATGTGACGTTTTAAGCCAATAGTTGACTAACCAGAGGTGGGATAACGTCAAGTCGCGTTGATTTAGTAACTTGCAGTGTCTGATACTTGAGATTTGTTTGACAGTTGTTTGACACgtgaaaaaaaatctattttaaaaaTCTGAATTGTTTGGCAAACTACTAtgacctgttggagacccctgtCCTATGTAACGCACTACATTTGAATAGGGTCACATATGCCCGATGGGTACTGGTCATAAATTACCATTTGGGATGAAAGCAGATACAGTACTAGATGACTATGTTGAACTCTCACCTGTAGTCTGGTCATGTCAGCGCTCTGTTTGTGAGTTGAGTTCTACTGCTTCCTGCTCTCCTTTTTTAAGGACCCATCCAGtcagacccctccctctctcatcctttaaccggtcaaataatcaactaatcatcaagcttttatcatttgaatcagctgtgttgtgttaGGGCAGAAACCAAAACGTATAGCCACGGGAAGAAGTTTGTTGGTGCAGGGTACTTTTAATGAATGTTATTTTCAATTGGGGTGCTGGAAAAATATCTTTGCCTGTGCTACAGGCGCTCTATTGTGAAAATGTAACAAATCTATAAAAAGttaacatatatacatatatacagtaccagtcaaaagtttggacacacctactcattcaaggctttttctttatttttactattttctttgtagaataatagtgaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU827584 True 1224 lncRNA 0.38 2 59700137 59708468

Neighbor

gene id symbol gene type direction distance location
LOC110530237 LOC106568845 coding upstream 488320 59188067 ~ 59211817 (+)
LOC110530235 LOC100136455 coding upstream 615283 59057416 ~ 59084854 (+)
LOC118965657 NA coding upstream 1027462 58672567 ~ 58672675 (+)
LOC110530233 LOC106599529 coding upstream 1050159 58335194 ~ 58649978 (+)
LOC110530232 LOC106568852 coding upstream 1431754 58165647 ~ 58268703 (+)
LOC110530248 crem coding downstream 40200 59748668 ~ 59768093 (+)
LOC110530249 LOC106568835 coding downstream 67262 59775730 ~ 59825064 (+)
LOC110530251 LOC106568834 coding downstream 116829 59825297 ~ 59828412 (+)
LOC110530253 LOC106568832 coding downstream 363665 60072133 ~ 60077499 (+)
LOC110530254 LOC106568831 coding downstream 447874 60156342 ~ 60168950 (+)
G728575 NA non-coding upstream 31691 59667911 ~ 59668446 (+)
G728570 NA non-coding upstream 36448 59663468 ~ 59663689 (+)
G728565 NA non-coding upstream 42689 59657207 ~ 59657448 (+)
G728564 NA non-coding upstream 44883 59655031 ~ 59655254 (+)
G728516 NA non-coding upstream 110505 59589408 ~ 59589632 (+)
G728609 NA non-coding downstream 61977 59770445 ~ 59770650 (+)
G728628 NA non-coding downstream 108795 59817263 ~ 59819000 (+)
G728638 LOC106568833 non-coding downstream 126423 59834891 ~ 59837406 (+)
G728642 NA non-coding downstream 135418 59843886 ~ 59844122 (+)
G728643 NA non-coding downstream 136317 59844785 ~ 59844994 (+)
G728057 LOC100136012 other upstream 718866 58980931 ~ 58981271 (+)
G727348 NA other upstream 1026132 58646859 ~ 58674005 (+)
G727161 NA other upstream 1342002 58357039 ~ 58358245 (+)
LOC118965533 NA other upstream 1846505 57850799 ~ 57854417 (+)
G725907 LOC106581475 other upstream 2144655 57554723 ~ 57555482 (+)
G730206 NA other downstream 1332100 61040568 ~ 61042129 (+)
G730267 NA other downstream 1450342 61158810 ~ 61159193 (+)
G730377 NA other downstream 1661559 61370027 ~ 61810354 (+)
G730425 NA other downstream 1721395 61429863 ~ 61468746 (+)

Expression


Co-expression Network