G728647


Basic Information

Item Value
gene id G728647
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 59851110 ~ 59851391 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU827658
tatacatgctacatggccaaaagtatgtgaacacctgcttgtcaaacatctcattgcaaaatcatgggcattaatatggagttggtcccccgctataacagcctccactcttctgggaaggctttccactagatgttggaacattgttgcagggacttgcttctagCCATGAGGTTATTGTGGTCGGGTACTgatattgggcgattaggcctcgctcgcagtcggcgttcaatattaatcccaaaggtgttcaatggggttgaggtcagggctctgtgcagt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU827658 True 282 lncRNA 0.48 1 59851110 59851391

Neighbor

gene id symbol gene type direction distance location
LOC110530251 LOC106568834 coding upstream 22698 59825297 ~ 59828412 (+)
LOC110530249 LOC106568835 coding upstream 26046 59775730 ~ 59825064 (+)
LOC110530248 crem coding upstream 83017 59748668 ~ 59768093 (+)
LOC110530237 LOC106568845 coding upstream 639293 59188067 ~ 59211817 (+)
LOC110530235 LOC100136455 coding upstream 766256 59057416 ~ 59084854 (+)
LOC110530253 LOC106568832 coding downstream 220742 60072133 ~ 60077499 (+)
LOC110530254 LOC106568831 coding downstream 304951 60156342 ~ 60168950 (+)
LOC110530256 LOC106568829 coding downstream 380920 60232311 ~ 60268663 (+)
LOC110530260 LOC106568826 coding downstream 469567 60320958 ~ 60346708 (+)
LOC110530261 LOC106568825 coding downstream 502547 60353938 ~ 60597494 (+)
G728643 NA non-coding upstream 6116 59844785 ~ 59844994 (+)
G728642 NA non-coding upstream 6988 59843886 ~ 59844122 (+)
G728638 LOC106568833 non-coding upstream 13704 59834891 ~ 59837406 (+)
G728628 NA non-coding upstream 32110 59817263 ~ 59819000 (+)
G728609 NA non-coding upstream 80460 59770445 ~ 59770650 (+)
G728648 NA non-coding downstream 2812 59854203 ~ 59854520 (+)
G728649 NA non-coding downstream 3738 59855129 ~ 59855396 (+)
G728651 NA non-coding downstream 5184 59856575 ~ 59856794 (+)
G728662 NA non-coding downstream 26891 59878282 ~ 59878486 (+)
G729164 NA non-coding downstream 111297 59962688 ~ 59962931 (+)
G728057 LOC100136012 other upstream 869839 58980931 ~ 58981271 (+)
G727348 NA other upstream 1177105 58646859 ~ 58674005 (+)
G727161 NA other upstream 1492975 58357039 ~ 58358245 (+)
LOC118965533 NA other upstream 1997478 57850799 ~ 57854417 (+)
G730206 NA other downstream 1189177 61040568 ~ 61042129 (+)
G730267 NA other downstream 1307419 61158810 ~ 61159193 (+)
G730377 NA other downstream 1518636 61370027 ~ 61810354 (+)
G730425 NA other downstream 1578472 61429863 ~ 61468746 (+)
G730447 NA other downstream 1615962 61467353 ~ 61468047 (+)

Expression


Co-expression Network