G728662


Basic Information

Item Value
gene id G728662
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 59878282 ~ 59878486 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU827673
CCAATCCCCTTTCCTCTCCGCTCTCTATTCTATGCAGATGAAGCCAACTTAAATAAGATATTGTGTaaaggcagatagacagacagacagacagtcagctgGTGGGGTGACAGATAGAGCTGAGAATTAGTAGTCTTCATTACAGTTATACGAATCAGACTTTAAGGGTACTGGAAGTGTAAAATAATGAAAGCCAGTGCTACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU827673 True 205 lncRNA 0.41 1 59878282 59878486

Neighbor

gene id symbol gene type direction distance location
LOC110530251 LOC106568834 coding upstream 49870 59825297 ~ 59828412 (+)
LOC110530249 LOC106568835 coding upstream 53218 59775730 ~ 59825064 (+)
LOC110530248 crem coding upstream 110189 59748668 ~ 59768093 (+)
LOC110530237 LOC106568845 coding upstream 666465 59188067 ~ 59211817 (+)
LOC110530235 LOC100136455 coding upstream 793428 59057416 ~ 59084854 (+)
LOC110530253 LOC106568832 coding downstream 193647 60072133 ~ 60077499 (+)
LOC110530254 LOC106568831 coding downstream 277856 60156342 ~ 60168950 (+)
LOC110530256 LOC106568829 coding downstream 353825 60232311 ~ 60268663 (+)
LOC110530260 LOC106568826 coding downstream 442472 60320958 ~ 60346708 (+)
LOC110530261 LOC106568825 coding downstream 475452 60353938 ~ 60597494 (+)
G728651 NA non-coding upstream 21488 59856575 ~ 59856794 (+)
G728649 NA non-coding upstream 22886 59855129 ~ 59855396 (+)
G728648 NA non-coding upstream 23762 59854203 ~ 59854520 (+)
G728647 NA non-coding upstream 26891 59851110 ~ 59851391 (+)
G728643 NA non-coding upstream 33288 59844785 ~ 59844994 (+)
G729164 NA non-coding downstream 84202 59962688 ~ 59962931 (+)
G729168 NA non-coding downstream 88868 59967354 ~ 59967571 (+)
G729231 NA non-coding downstream 186787 60065273 ~ 60065589 (+)
G729247 NA non-coding downstream 212878 60091364 ~ 60091825 (+)
G729263 NA non-coding downstream 229213 60107699 ~ 60107900 (+)
G728057 LOC100136012 other upstream 897011 58980931 ~ 58981271 (+)
G727348 NA other upstream 1204277 58646859 ~ 58674005 (+)
G727161 NA other upstream 1520147 58357039 ~ 58358245 (+)
LOC118965533 NA other upstream 2024650 57850799 ~ 57854417 (+)
G730206 NA other downstream 1162082 61040568 ~ 61042129 (+)
G730267 NA other downstream 1280324 61158810 ~ 61159193 (+)
G730377 NA other downstream 1491541 61370027 ~ 61810354 (+)
G730425 NA other downstream 1551377 61429863 ~ 61468746 (+)
G730447 NA other downstream 1588867 61467353 ~ 61468047 (+)

Expression


Co-expression Network