G729437


Basic Information

Item Value
gene id G729437
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 60446394 ~ 60447750 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU828510
tcttagagagagggagcagagttcttacacacagagagagggagcagagttcttagggagacggagcagagttcttacacacatagggagagggagcagagagttcTTGCACAcatagggagagggagcagagagttcttgcacacatagagagagagcagagagttctTACACacagagggagcagagttcttagggagacggagcagagttcttacacacatagggagagggagcagagttcttagggagacggagcagagttcttacacacatagggagagggagcagagttcttagggagacggagcagagttcttacacacatagggagagggagcagagagttcTTGCACAcatagggagagggagcagagagttcttacacacagggagagggagcagagagttcTTGCACCCATaaggagagggagcagagttcttgcacacatagggagagggagcagagagttattacacacatagggagagggagcagagagttcttgcacacatagagagagggagcagagttcttagagagagggagcagagttcttagagagagggagcagagttcttagagagagggagcagagttcttagagagagggagcagagttcttagagagagggagcagagttcttagagagagggagcagagttcttagagagagggagcagagttcttagagagagggagcagagttcttagagagagggagcagagttcttagagagggagcagagttcttagagagggagcagagttcttagagagagggagcagagttcttagagagagggagcagagttcttagagagggagcagagttcttagagagagggagcagagttcttagggagacggagcagagttcttacacacatagggagagggagcagagttcttagggagacggagcagagttcttacacacatagagagagggagcagagttcttagggAGACGGAGCAGAGTTCTTACACACATAGGGAGACGGAGCAGAGTTCTTACACACATAgcgagagggagcagagagttcTTGCACAcatagggagagggagcagagagttcttacacacatagggagagggagcagagagttcTTGCACCCATaaggagagggagcagagttcttgcacacatagggagagggagcagagagttcttacacacatagggagagggagcagagagttcttgcacacatagagagagggagcagagttcttagagagagggagcagagttcttagagagagggagcag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU828510 True 1275 lncRNA 0.51 2 60446394 60447750

Neighbor

gene id symbol gene type direction distance location
LOC110530260 LOC106568826 coding upstream 99686 60320958 ~ 60346708 (+)
LOC110530256 LOC106568829 coding upstream 177731 60232311 ~ 60268663 (+)
LOC110530254 LOC106568831 coding upstream 277444 60156342 ~ 60168950 (+)
LOC110530253 LOC106568832 coding upstream 368895 60072133 ~ 60077499 (+)
LOC110530251 LOC106568834 coding upstream 617982 59825297 ~ 59828412 (+)
LOC110530263 LOC106568823 coding downstream 187354 60635104 ~ 60677201 (+)
LOC110530264 LOC106568822 coding downstream 267156 60714906 ~ 60775318 (+)
LOC110530265 LOC106568821 coding downstream 338201 60785951 ~ 60934070 (+)
lactb2 lactb2 coding downstream 513966 60961716 ~ 60969454 (+)
LOC110530268 LOC106568819 coding downstream 523850 60971600 ~ 61047289 (+)
G729436 NA non-coding upstream 720 60442981 ~ 60445674 (+)
G729360 LOC106562215 non-coding upstream 173378 60271941 ~ 60273016 (+)
G729359 NA non-coding upstream 177347 60268766 ~ 60269047 (+)
G729306 LOC106568830 non-coding upstream 192985 60185436 ~ 60253409 (+)
G729172 NA non-coding upstream 276319 60138737 ~ 60170075 (+)
G729534 NA non-coding downstream 216461 60664211 ~ 60664454 (+)
G730125 NA non-coding downstream 407914 60855664 ~ 60911767 (+)
G730168 NA non-coding downstream 444801 60892551 ~ 60893900 (+)
G730167 NA non-coding downstream 446355 60894105 ~ 60896626 (+)
G730190 NA non-coding downstream 599789 61047539 ~ 61048522 (+)
LOC110530248 crem other upstream 680036 59748668 ~ 59768093 (+)
G728057 LOC100136012 other upstream 1465123 58980931 ~ 58981271 (+)
G727348 NA other upstream 1772389 58646859 ~ 58674005 (+)
G727161 NA other upstream 2088259 58357039 ~ 58358245 (+)
LOC118965533 NA other upstream 2592762 57850799 ~ 57854417 (+)
G730206 NA other downstream 592818 61040568 ~ 61042129 (+)
G730267 NA other downstream 711060 61158810 ~ 61159193 (+)
G730377 NA other downstream 922277 61370027 ~ 61810354 (+)
G730425 NA other downstream 982113 61429863 ~ 61468746 (+)
G730447 NA other downstream 1019603 61467353 ~ 61468047 (+)

Expression


Co-expression Network