G730264


Basic Information

Item Value
gene id G730264
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 61159393 ~ 61160880 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU829403
cactgtatgtgtgtgtgtgtgtgtacatagttCATGTTGATAGATGATAAGGAAAGATCCATCAATTCAAGAATAGCTGATCATTATTTTTCCATGAACCGCCTGCAGTTTTAGTTGTTTTGAGAACATGCAATGCTAGCATTTTATTATTCAattgaaataatacatttacttTTGCACTTGGAATTCAAGAGATGGAATTAAGGCATGTTGTTGTGCAGGGGTGTGTTGAGCCCTATATGCTACCTTTATTGCTCTTGGGAACAACTAATGGGAACATTAGAATAAACTTGAGATGACccaagcatagaaatagaatgattcATTTTAATTATTTGGAACCAACAATCAGCTTGTATTACTAAGAATGTTATGCCTAGTTGCTTTACTGCTATTCAGCTCTAGAATTTCAACACAACATCCACAATTTGAATCACTCAAAAAAGAACTGGGCCAATGGGATATATTAAAGTGCTGTTAACATGTATGCCTAGTTGGTGAGTGTGACATGAGATGTCTTGATCTTTTGGTGCAGAACGTGATGTATCCCTTGAGAAATCATTGAAAGGTGTCATGGAGAAGGTACATTTGGTATCTCATAAACACAAAACTACATCTCACTGTGGTGTTTGAAGTATATTTCCAATTGGTTGTTCATCTAATGCAGTTGAATGTAAACTTATAGGCAAACTGTGTAGTTGTTACACAGATCAGTTTTTGTGGCATTAAATTCCTCTCCAGACATTATAAAACATAACTCCTGGTTTGTTTGTCGGAATTTCAACCTAAAAGTGGGTTGCGGTGTTGATAGGCCCCGGCCTCAAAAGGTAGAGGTCTCATGAATTGAGTTTACACTTTTGTTGCCAACCAATATTTTGGAGTATTCCAGATCACCTTGTTGTTCTAGAATGACATGGTAACTTTGGATGCTGCCATTATCAGCTTATGGCCTTAAAACATTTAGTCTTACTGAGTCTTGGCCTGACTTCTGGACAAGGTTTCTTATTATGGCAAAAAGCAGTTATATTTGTACCGGCCAAAAAAAACAATTGCaggtaacattttttttttaaagctccaTGGCTTTTCTTTTGAGTGAACAAAATGTCAAACTCAGCACTTTCAGAAAAAGAGGGACTGTGAGAATAGAGCATGTACTAGCTAAACTCAAACAAATAGTGATATTTTCAGTCCAAGGAAGAATAAAAAGGAAATGTTAAACTTGCCTAACTCAGACAACACTGATTTGACAAACTTGAAGTTTGTTTTTTTGAGACTGCTGTACTAATTACATATATTGTAAGCCAGTTGTATTATAATAGTATATATTGTAGTATACTTAGATCTGTACATAAACTCAAGTTATTCGGTAAAATGTTTAGTTAACTTTTTTCTTGTTTGCTAATAAAATATTGAAGATACCACAGCTACAACATTGCTGTTTGCATGTGTGATGACTTTTTAACCCAACAATAAAGTAATTGCTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU829403 True 1488 lncRNA 0.35 1 61159393 61160880

Neighbor

gene id symbol gene type direction distance location
LOC110530272 vcpip1 coding upstream 6460 61145742 ~ 61152933 (+)
LOC110530950 LOC105018391 coding upstream 41482 61100767 ~ 61117911 (+)
LOC110530270 LOC106569033 coding upstream 69729 61054258 ~ 61089664 (+)
LOC110530268 LOC106568819 coding upstream 112104 60971600 ~ 61047289 (+)
lactb2 lactb2 coding upstream 189939 60961716 ~ 60969454 (+)
LOC110530951 LOC106569038 coding downstream 603 61161483 ~ 61184967 (+)
LOC110530277 LOC106569042 coding downstream 59411 61220291 ~ 61221651 (+)
LOC110530278 pde7a coding downstream 84362 61245242 ~ 61296169 (+)
LOC110530279 armc1 coding downstream 136808 61297688 ~ 61305678 (+)
LOC110530280 LOC106569045 coding downstream 166268 61327148 ~ 61339612 (+)
G730262 NA non-coding upstream 17931 61140563 ~ 61141462 (+)
G730250 NA non-coding upstream 31641 61126527 ~ 61127752 (+)
G730208 NA non-coding upstream 106643 61052538 ~ 61052750 (+)
G730188 NA non-coding upstream 108030 61048867 ~ 61051363 (+)
G730278 NA non-coding downstream 11738 61172618 ~ 61172840 (+)
G730279 NA non-coding downstream 12508 61173388 ~ 61173701 (+)
G730334 NA non-coding downstream 92326 61253206 ~ 61262867 (+)
G730343 NA non-coding downstream 117459 61278339 ~ 61278589 (+)
G730355 NA non-coding downstream 153458 61314338 ~ 61314555 (+)
G730267 NA other upstream 200 61158810 ~ 61159193 (+)
G730206 NA other upstream 117264 61040568 ~ 61042129 (+)
LOC110530248 crem other upstream 1393035 59748668 ~ 59768093 (+)
G728057 LOC100136012 other upstream 2178122 58980931 ~ 58981271 (+)
G727348 NA other upstream 2485388 58646859 ~ 58674005 (+)
G730377 NA other downstream 209147 61370027 ~ 61810354 (+)
G730425 NA other downstream 268983 61429863 ~ 61468746 (+)
G730447 NA other downstream 306473 61467353 ~ 61468047 (+)
G730468 NA other downstream 326696 61487576 ~ 61488104 (+)
G730469 NA other downstream 327277 61488157 ~ 61515470 (+)

Expression


Co-expression Network