G730278


Basic Information

Item Value
gene id G730278
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 61172618 ~ 61172840 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU829432
catcgcacaccactccctagcatactacttgCCAAtgcccagtctcttgacaacaaggttgatgaaatccgagcaagggttgccttccagagagacatcagagactaacgttctttgcttaACGGAAACATgactcactcgagagacgctatcggagttggtgcagccagctggtttcttcacgcatcgccccgacagaaacaagcatctttctggtaagaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU829432 True 223 lncRNA 0.49 1 61172618 61172840

Neighbor

gene id symbol gene type direction distance location
LOC110530272 vcpip1 coding upstream 19685 61145742 ~ 61152933 (+)
LOC110530950 LOC105018391 coding upstream 54707 61100767 ~ 61117911 (+)
LOC110530270 LOC106569033 coding upstream 82954 61054258 ~ 61089664 (+)
LOC110530268 LOC106568819 coding upstream 125329 60971600 ~ 61047289 (+)
lactb2 lactb2 coding upstream 203164 60961716 ~ 60969454 (+)
LOC110530277 LOC106569042 coding downstream 47451 61220291 ~ 61221651 (+)
LOC110530278 pde7a coding downstream 72402 61245242 ~ 61296169 (+)
LOC110530279 armc1 coding downstream 124848 61297688 ~ 61305678 (+)
LOC110530280 LOC106569045 coding downstream 154308 61327148 ~ 61339612 (+)
LOC118965539 NA coding downstream 170956 61343405 ~ 61348640 (+)
G730264 NA non-coding upstream 11738 61159393 ~ 61160880 (+)
G730262 NA non-coding upstream 31156 61140563 ~ 61141462 (+)
G730250 NA non-coding upstream 44866 61126527 ~ 61127752 (+)
G730208 NA non-coding upstream 119868 61052538 ~ 61052750 (+)
G730279 NA non-coding downstream 548 61173388 ~ 61173701 (+)
G730334 NA non-coding downstream 80366 61253206 ~ 61262867 (+)
G730343 NA non-coding downstream 105499 61278339 ~ 61278589 (+)
G730355 NA non-coding downstream 141498 61314338 ~ 61314555 (+)
G730360 NA non-coding downstream 150007 61322847 ~ 61323094 (+)
G730267 NA other upstream 13425 61158810 ~ 61159193 (+)
G730206 NA other upstream 130489 61040568 ~ 61042129 (+)
LOC110530248 crem other upstream 1406260 59748668 ~ 59768093 (+)
G728057 LOC100136012 other upstream 2191347 58980931 ~ 58981271 (+)
G727348 NA other upstream 2498613 58646859 ~ 58674005 (+)
G730377 NA other downstream 197187 61370027 ~ 61810354 (+)
G730425 NA other downstream 257023 61429863 ~ 61468746 (+)
G730447 NA other downstream 294513 61467353 ~ 61468047 (+)
G730468 NA other downstream 314736 61487576 ~ 61488104 (+)
G730469 NA other downstream 315317 61488157 ~ 61515470 (+)

Expression


Co-expression Network