Gene
RNA
| Item | Value |
|---|---|
| gene id | G730425 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 61429863 ~ 61468746 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU829598 | False | 384 | TUCP | 0.45 | 2 | 61429863 | 61468746 |
| TU829596 | True | 390 | TUCP | 0.45 | 2 | 61468194 | 61468746 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530952 | LOC106569062 | coding | upstream | 54399 | 61370585 ~ 61375464 (+) |
| LOC118965539 | NA | coding | upstream | 84978 | 61343405 ~ 61348640 (+) |
| LOC110530280 | LOC106569045 | coding | upstream | 90251 | 61327148 ~ 61339612 (+) |
| LOC110530279 | armc1 | coding | upstream | 124185 | 61297688 ~ 61305678 (+) |
| LOC110530278 | pde7a | coding | upstream | 133694 | 61245242 ~ 61296169 (+) |
| LOC110530301 | LOC106569066 | coding | downstream | 565869 | 62034615 ~ 62046177 (+) |
| LOC110530305 | klhl20 | coding | downstream | 819824 | 62288570 ~ 62299158 (+) |
| LOC110530308 | LOC100380755 | coding | downstream | 1152499 | 62621245 ~ 62881609 (+) |
| LOC110530310 | LOC106569074 | coding | downstream | 1502813 | 62971559 ~ 63003590 (+) |
| LOC110530311 | LOC106569075 | coding | downstream | 1590778 | 63059524 ~ 63187183 (+) |
| G730360 | NA | non-coding | upstream | 106769 | 61322847 ~ 61323094 (+) |
| G730355 | NA | non-coding | upstream | 115308 | 61314338 ~ 61314555 (+) |
| G730343 | NA | non-coding | upstream | 151274 | 61278339 ~ 61278589 (+) |
| G730334 | NA | non-coding | upstream | 166996 | 61253206 ~ 61262867 (+) |
| G730401 | NA | non-coding | downstream | 119621 | 61588367 ~ 61593191 (+) |
| G730547 | NA | non-coding | downstream | 156984 | 61625730 ~ 61626228 (+) |
| G730377 | NA | non-coding | downstream | 341169 | 61370027 ~ 61810354 (+) |
| G730694 | LOC106569104 | non-coding | downstream | 402210 | 61867561 ~ 61874667 (+) |
| G730713 | NA | non-coding | downstream | 426963 | 61895709 ~ 61899251 (+) |
| G730267 | NA | other | upstream | 270670 | 61158810 ~ 61159193 (+) |
| G730206 | NA | other | upstream | 387734 | 61040568 ~ 61042129 (+) |
| LOC110530248 | crem | other | upstream | 1663505 | 59748668 ~ 59768093 (+) |
| G728057 | LOC100136012 | other | upstream | 2448592 | 58980931 ~ 58981271 (+) |
| G727348 | NA | other | upstream | 2755858 | 58646859 ~ 58674005 (+) |
| G730468 | NA | other | downstream | 18830 | 61487576 ~ 61488104 (+) |
| G730469 | NA | other | downstream | 19411 | 61488157 ~ 61515470 (+) |
| G730479 | NA | other | downstream | 30885 | 61499631 ~ 61500142 (+) |
| G730489 | NA | other | downstream | 46171 | 61514917 ~ 61515440 (+) |
| G730464 | NA | other | downstream | 159807 | 61628553 ~ 61629193 (+) |
