Gene
RNA
| Item | Value |
|---|---|
| gene id | G730690 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 61860485 ~ 61861119 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| T-cell receptor V-alpha3 chain, partial |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU829914 | True | 445 | TUCP | 0.44 | 2 | 61860485 | 61861119 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530952 | LOC106569062 | coding | upstream | 485021 | 61370585 ~ 61375464 (+) |
| LOC118965539 | NA | coding | upstream | 515600 | 61343405 ~ 61348640 (+) |
| LOC110530280 | LOC106569045 | coding | upstream | 520873 | 61327148 ~ 61339612 (+) |
| LOC110530279 | armc1 | coding | upstream | 554807 | 61297688 ~ 61305678 (+) |
| LOC110530278 | pde7a | coding | upstream | 564316 | 61245242 ~ 61296169 (+) |
| LOC110530301 | LOC106569066 | coding | downstream | 173496 | 62034615 ~ 62046177 (+) |
| LOC110530305 | klhl20 | coding | downstream | 427451 | 62288570 ~ 62299158 (+) |
| LOC110530308 | LOC100380755 | coding | downstream | 760126 | 62621245 ~ 62881609 (+) |
| LOC110530310 | LOC106569074 | coding | downstream | 1110440 | 62971559 ~ 63003590 (+) |
| LOC110530311 | LOC106569075 | coding | downstream | 1198405 | 63059524 ~ 63187183 (+) |
| G730377 | NA | non-coding | upstream | 50131 | 61370027 ~ 61810354 (+) |
| G730547 | NA | non-coding | upstream | 234257 | 61625730 ~ 61626228 (+) |
| G730401 | NA | non-coding | upstream | 267294 | 61588367 ~ 61593191 (+) |
| G730360 | NA | non-coding | upstream | 537391 | 61322847 ~ 61323094 (+) |
| G730694 | LOC106569104 | non-coding | downstream | 9837 | 61867561 ~ 61874667 (+) |
| G730713 | NA | non-coding | downstream | 34590 | 61895709 ~ 61899251 (+) |
| G730747 | LOC106569062 | non-coding | downstream | 81366 | 61942485 ~ 61943400 (+) |
| G730752 | NA | non-coding | downstream | 96270 | 61957389 ~ 61980690 (+) |
| G730761 | NA | non-coding | downstream | 171265 | 62032384 ~ 62049946 (+) |
| G730629 | NA | other | upstream | 44875 | 61815071 ~ 61815610 (+) |
| G730590 | NA | other | upstream | 163844 | 61696147 ~ 61696641 (+) |
| G730464 | NA | other | upstream | 231292 | 61628553 ~ 61629193 (+) |
| G730469 | NA | other | upstream | 345015 | 61488157 ~ 61515470 (+) |
| G732052 | NA | other | downstream | 541830 | 62402949 ~ 62404191 (+) |
| G732350 | NA | other | downstream | 936582 | 62797701 ~ 62882948 (+) |
| LOC118965541 | LOC106569076 | other | downstream | 1338381 | 63188433 ~ 63206250 (+) |
| LOC110530316 | LOC106569082 | other | downstream | 1514377 | 63375496 ~ 63430577 (+) |
