G730821


Basic Information

Item Value
gene id G730821
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 62067204 ~ 62067569 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU830060
CAATAATGCTTTATAAAACAGTGTTTCACAATCAATAGACAAGGCAGAAAATCCAACCATAACATAACTGGGTTGTTCTGCCAACTAAGTGTCTTTTCAGTGAAACTTAGTGAAAACAAACTTGAGTTCACATAATTTGAAcattgtcataaagagcacatgttcaacttagtAAAAAAACAAGTTTTTCCATCTAaagaggtgaaataaaataaaatgcctATTCAGTTcaaaataaagtaacagggttgacaactTGATCTTAAATCAGCCATTCATTTTAAGCTTGTGTGCAACAAGGAGATGCAATTGAATGCAAAATTCACCAAAAATACATTGTTTAACCATTTCTAGcgtgtctatcta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU830060 True 366 lncRNA 0.32 1 62067204 62067569

Neighbor

gene id symbol gene type direction distance location
LOC110530301 LOC106569066 coding upstream 21027 62034615 ~ 62046177 (+)
LOC110530952 LOC106569062 coding upstream 691740 61370585 ~ 61375464 (+)
LOC118965539 NA coding upstream 722319 61343405 ~ 61348640 (+)
LOC110530280 LOC106569045 coding upstream 727592 61327148 ~ 61339612 (+)
LOC110530279 armc1 coding upstream 761526 61297688 ~ 61305678 (+)
LOC110530305 klhl20 coding downstream 221001 62288570 ~ 62299158 (+)
LOC110530308 LOC100380755 coding downstream 553676 62621245 ~ 62881609 (+)
LOC110530310 LOC106569074 coding downstream 903990 62971559 ~ 63003590 (+)
LOC110530311 LOC106569075 coding downstream 991955 63059524 ~ 63187183 (+)
LOC118965541 LOC106569076 coding downstream 1120864 63188433 ~ 63206250 (+)
G730819 NA non-coding upstream 1147 62065831 ~ 62066057 (+)
G730818 NA non-coding upstream 1392 62065524 ~ 62065812 (+)
G730761 NA non-coding upstream 17258 62032384 ~ 62049946 (+)
G730752 NA non-coding upstream 86514 61957389 ~ 61980690 (+)
G730747 LOC106569062 non-coding upstream 123804 61942485 ~ 61943400 (+)
G730813 LOC106569067 non-coding downstream 565 62068134 ~ 62070889 (+)
G730852 NA non-coding downstream 50006 62117575 ~ 62119475 (+)
G730987 NA non-coding downstream 234263 62301832 ~ 62303132 (+)
G731993 NA non-coding downstream 294068 62361637 ~ 62361989 (+)
G731995 NA non-coding downstream 295530 62363099 ~ 62363301 (+)
G730694 LOC106569104 other upstream 195644 61867561 ~ 61874667 (+)
G730690 NA other upstream 206085 61860485 ~ 61861119 (+)
G730629 NA other upstream 251594 61815071 ~ 61815610 (+)
G730590 NA other upstream 370563 61696147 ~ 61696641 (+)
G730464 NA other upstream 438011 61628553 ~ 61629193 (+)
G732052 NA other downstream 335380 62402949 ~ 62404191 (+)
G732350 NA other downstream 730132 62797701 ~ 62882948 (+)
LOC110530316 LOC106569082 other downstream 1307927 63375496 ~ 63430577 (+)
G733571 LOC106569085 other downstream 1480018 63547587 ~ 63548743 (+)

Expression


Co-expression Network