G730987


Basic Information

Item Value
gene id G730987
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 62301832 ~ 62303132 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU830243
CTGTGATATCACATGACTTTGGAGCCTTTCTACTTCTTGGTATTCTTAGAGCTGTCAAAAGGCCTGATGTGTATGTCAGATGAGTTGCTTCAACACAGCTTCGCATTGATTGCCTGTAACTCTTGCTCCTTCGTTGTGCCAAGGCATTGTTGCGTGGGGTCTCCTCAGTGCTGGCAATTACGCACGAATATTCCTTTTAAATCTTGTCGAGTCCCATGAAAAGACAGTCTaaaaaagcttgttggacacttaTTTCGGTTTATTTTCTTTCGCCTACTAATAGCCTATTTGAGGAGAGATGTACGCTTGCTGAATGTAAAATAAGCTACAGCATGAACGAGCGGGGAGTAGGAAGGAGAATCCCATTTTTTCCTATAGTAGGCCCATCTTAACACCGGGCTAGATCCTAACAAAAATAGGCTTCCCATATGATTGGCCTGCTAAAAAGACAAACGGggcagtgaaaaaaaaaaaacatgatcatACATTCGGCTTTCC

Function

NR:

description
centromere protein L-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU830243 True 498 lncRNA 0.42 2 62301832 62303132

Neighbor

gene id symbol gene type direction distance location
LOC110530305 klhl20 coding upstream 2674 62288570 ~ 62299158 (+)
LOC110530301 LOC106569066 coding upstream 255655 62034615 ~ 62046177 (+)
LOC110530952 LOC106569062 coding upstream 926368 61370585 ~ 61375464 (+)
LOC118965539 NA coding upstream 956947 61343405 ~ 61348640 (+)
LOC110530280 LOC106569045 coding upstream 962220 61327148 ~ 61339612 (+)
LOC110530308 LOC100380755 coding downstream 318113 62621245 ~ 62881609 (+)
LOC110530310 LOC106569074 coding downstream 668427 62971559 ~ 63003590 (+)
LOC110530311 LOC106569075 coding downstream 756392 63059524 ~ 63187183 (+)
LOC118965541 LOC106569076 coding downstream 885301 63188433 ~ 63206250 (+)
LOC110529126 NA coding downstream 949036 63252168 ~ 63258568 (+)
G730852 NA non-coding upstream 182357 62117575 ~ 62119475 (+)
G730813 LOC106569067 non-coding upstream 230943 62068134 ~ 62070889 (+)
G730821 NA non-coding upstream 234263 62067204 ~ 62067569 (+)
G730819 NA non-coding upstream 235775 62065831 ~ 62066057 (+)
G730818 NA non-coding upstream 236020 62065524 ~ 62065812 (+)
G731993 NA non-coding downstream 58505 62361637 ~ 62361989 (+)
G731995 NA non-coding downstream 59967 62363099 ~ 62363301 (+)
G732004 NA non-coding downstream 67178 62370310 ~ 62370540 (+)
G732007 NA non-coding downstream 68644 62371776 ~ 62372044 (+)
G732050 NA non-coding downstream 98601 62401733 ~ 62401960 (+)
G730694 LOC106569104 other upstream 430272 61867561 ~ 61874667 (+)
G730690 NA other upstream 440713 61860485 ~ 61861119 (+)
G730629 NA other upstream 486222 61815071 ~ 61815610 (+)
G730590 NA other upstream 605191 61696147 ~ 61696641 (+)
G730464 NA other upstream 672639 61628553 ~ 61629193 (+)
G732052 NA other downstream 99817 62402949 ~ 62404191 (+)
G732350 NA other downstream 494569 62797701 ~ 62882948 (+)
LOC110530316 LOC106569082 other downstream 1072364 63375496 ~ 63430577 (+)
G733571 LOC106569085 other downstream 1244455 63547587 ~ 63548743 (+)

Expression


Co-expression Network