G733175


Basic Information

Item Value
gene id G733175
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 63269241 ~ 63269450 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU832628
ATTAAATCTAAATCAAAGTTGCGCAGGAATACAGCGTAGTGTGCACAATACAATGAAATAAGTAGATAACTTCAGTATATTAAGTACAGATCAGTAGGTGCCATAGCAGTAAAGACTTTTCATCAACAGTCTTATTGCTTGGAAGGTGAAACTGTCTCTCTTCATGGTGCTACTACACTTGATGTTCTGATACAGTTTGCTAGGAGCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU832628 True 210 lncRNA 0.38 1 63269241 63269450

Neighbor

gene id symbol gene type direction distance location
LOC110529126 NA coding upstream 10673 63252168 ~ 63258568 (+)
LOC118965541 LOC106569076 coding upstream 62995 63188433 ~ 63206250 (+)
LOC110530311 LOC106569075 coding upstream 82058 63059524 ~ 63187183 (+)
LOC110530310 LOC106569074 coding upstream 265651 62971559 ~ 63003590 (+)
LOC110530308 LOC100380755 coding upstream 387632 62621245 ~ 62881609 (+)
LOC118965630 NA coding downstream 7077 63276527 ~ 63279438 (+)
LOC110530313 LOC106569079 coding downstream 11556 63281006 ~ 63288829 (+)
LOC110530316 LOC106569082 coding downstream 106591 63375496 ~ 63430577 (+)
ptch2 LOC106569083 coding downstream 165909 63435359 ~ 63466410 (+)
LOC118965542 NA coding downstream 290206 63559656 ~ 63570616 (+)
G733172 NA non-coding upstream 1693 63267329 ~ 63267548 (+)
G733170 NA non-coding upstream 3837 63265101 ~ 63265404 (+)
G733169 NA non-coding upstream 4224 63264524 ~ 63265017 (+)
G733168 NA non-coding upstream 4813 63263872 ~ 63264428 (+)
G733144 NA non-coding upstream 13243 63255590 ~ 63255998 (+)
G733180 LOC106569080 non-coding downstream 21518 63290968 ~ 63293802 (+)
G733203 NA non-coding downstream 61381 63330831 ~ 63331041 (+)
G733204 NA non-coding downstream 61933 63331383 ~ 63331697 (+)
G733206 NA non-coding downstream 65735 63335185 ~ 63335398 (+)
G733210 NA non-coding downstream 71941 63341391 ~ 63341636 (+)
G732350 NA other upstream 386293 62797701 ~ 62882948 (+)
G732052 NA other upstream 865050 62402949 ~ 62404191 (+)
G730694 LOC106569104 other upstream 1397681 61867561 ~ 61874667 (+)
G730690 NA other upstream 1408122 61860485 ~ 61861119 (+)
G733571 LOC106569085 other downstream 278137 63547587 ~ 63548743 (+)
LOC110530334 LOC106569251 other downstream 1276830 64546280 ~ 64551340 (+)
G734690 LOC106569249 other downstream 1349590 64619040 ~ 64620007 (+)
LOC110530343 LOC106569291 other downstream 1427863 64697289 ~ 64698526 (+)

Expression


Co-expression Network