G734104


Basic Information

Item Value
gene id G734104
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 63985328 ~ 63987090 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU833645
TTGGGGTTTGAATTCAGTCATAAACCtttcatttctttattttttgtcAGCATACATCAATACAGACATCACAGGATACATAGTTTTACAAATACAAAGCACACCACCTTGCTGTGGGGTAGTGTTCAGTCACTGGGCTTTGGCAATCAGTTGGCCAACCCAACATGGCGGCCCACTCCTCTTTTCCCTTACAGATGGGAAGGACCTACCGTTACGAGTTGCCATGGTGGAGCCTTTGCTGGGTAGCACAATGGAAGGAACACTCAAACATTTCTGGAGGAGAAGCATTTTATGGGGCTTTATCAGAGCGGAGGACAAAACAGAAAACCAAAGTGATTAGTAAAGTTATATGATCAAAAACTGAGGTGGGAGGTGGAGGTTAACTCAACTGCGTTCCAGGTTGCGATTTTGAAAATAGCTGTTTGGCCAGCGTTGCAGCTCTGTACAATTCAAAGCCATCATCTCTCCTAGTCTAGGGTTAGAGCCATTTGAATCTTTACATTCcattaaactaaataaaaataaacatcatCTTCTTGCTTTAGGTTTACATCTTCTACAGATGTTACTGTATAGTTTAATGAAAAATGTACACCATCTAAACCTTGAATTTCTAATTGAGtagtttattattattactttaaaTGTATTCCTGTACAATGAAATAGAACTTCAACCTCAACCTCAAGATGACAAAATTGGTTTAAAAATACAGAGGGCTTTCTTTTTGTCCATtttttaaacccCCCCCTTACCAAGTCTTCAAGCAGGGTGCGACTACCGGTGGTCAGCTTAATATCTAGCTTGGCTGAGGGGGGTTTTCCACACAGAGGGAGTTACACCACCACCTCCTGCCACCTGAACACACCTCTCCGCAGGGATGATGGTGCTCAGTGAGTAACACAGCAGTGTGAAGATGGGTCATCGGAGCTACAGGATCAAAAAACACAGAACCAGAAGTGTCAGCCAGGGTGGAGGGTATCTGACTGGACTAGACCACTCACCACTAGAGGGCAGGGTGGAGGGTATCTGACTGGACTAGACCAcccaccaccagagggcatctgaCTGGATAGATCGTCCACCACTAGAGGGCAGGGTGGAGGGAGCCAGTGAGGGGTGGTTGGTTAGTCATTCTGAGAACACTCGGTCATAATGAACTACTTGGTTAGGTTCTGTTCCAatgtttggttggttggttgatcaGTCAGTCCTCCCCTGGTCTGAAGAGTCATTCAATACATCAGTAATCTCTCTAAGCTCTGAAGGGGCTTCACAAACCCAGGCTCACGTAAGGTCAACAAAAACAAATACTGAGAGAGCAAATGGAAATATGAGGAacaaatggagggaggaggggatggaggtgtAGGCCGGTCAGGGCAGGCGCCATCTTCTTCACATGTAGACGCGCCTTAGATCTCCTGGCGATGTGATGGTGTTGCATTGTGGGCACAGTTTCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU833645 True 1464 lncRNA 0.45 2 63985328 63987090

Neighbor

gene id symbol gene type direction distance location
ccdc24 LOC106569089 coding upstream 182765 63778335 ~ 63802563 (+)
LOC110530319 b4galt2 coding upstream 224814 63613362 ~ 63760514 (+)
atp6v0b atp6v0b coding upstream 372608 63603198 ~ 63612720 (+)
LOC118965542 NA coding upstream 423568 63559656 ~ 63570616 (+)
ptch2 LOC106569083 coding upstream 518918 63435359 ~ 63466410 (+)
LOC110530325 LOC106569259 coding downstream 315391 64302481 ~ 64336545 (+)
LOC110530327 LOC106569258 coding downstream 354194 64341284 ~ 64344020 (+)
selenop2 LOC106569257 coding downstream 359661 64346751 ~ 64349881 (+)
elovl8a LOC106569295 coding downstream 364579 64351669 ~ 64358704 (+)
zswim5 LOC106569256 coding downstream 446015 64433105 ~ 64498150 (+)
G734048 NA non-coding upstream 52133 63932646 ~ 63933195 (+)
G733697 NA non-coding upstream 181943 63802729 ~ 63803385 (+)
G733730 NA non-coding upstream 187362 63797726 ~ 63797966 (+)
G733729 NA non-coding upstream 187959 63797141 ~ 63797369 (+)
G733726 NA non-coding upstream 193621 63791412 ~ 63791707 (+)
G734136 NA non-coding downstream 53617 64040707 ~ 64040929 (+)
G734137 NA non-coding downstream 57423 64044513 ~ 64045112 (+)
G734140 NA non-coding downstream 65241 64052331 ~ 64052652 (+)
G734143 NA non-coding downstream 67548 64054638 ~ 64054915 (+)
G734148 NA non-coding downstream 76898 64063988 ~ 64064191 (+)
G733571 LOC106569085 other upstream 436585 63547587 ~ 63548743 (+)
LOC110530316 LOC106569082 other upstream 557661 63375496 ~ 63430577 (+)
LOC118965541 LOC106569076 other upstream 780432 63188433 ~ 63206250 (+)
G732350 NA other upstream 1102380 62797701 ~ 62882948 (+)
G732052 NA other upstream 1581137 62402949 ~ 62404191 (+)
LOC110530334 LOC106569251 other downstream 559190 64546280 ~ 64551340 (+)
G734690 LOC106569249 other downstream 631950 64619040 ~ 64620007 (+)
LOC110530343 LOC106569291 other downstream 710223 64697289 ~ 64698526 (+)
G735047 NA other downstream 834525 64821615 ~ 64822045 (+)
G735064 NA other downstream 843534 64830624 ~ 64830903 (+)

Expression


Co-expression Network