Gene
RNA
| Item | Value |
|---|---|
| gene id | G734136 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 64040707 ~ 64040929 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: E3 ubiquitin-protein ligase RNF220-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU833677 | True | 223 | lncRNA | 0.61 | 1 | 64040707 | 64040929 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ccdc24 | LOC106569089 | coding | upstream | 238144 | 63778335 ~ 63802563 (+) |
| LOC110530319 | b4galt2 | coding | upstream | 280193 | 63613362 ~ 63760514 (+) |
| atp6v0b | atp6v0b | coding | upstream | 427987 | 63603198 ~ 63612720 (+) |
| LOC118965542 | NA | coding | upstream | 478947 | 63559656 ~ 63570616 (+) |
| ptch2 | LOC106569083 | coding | upstream | 574297 | 63435359 ~ 63466410 (+) |
| LOC110530325 | LOC106569259 | coding | downstream | 261552 | 64302481 ~ 64336545 (+) |
| LOC110530327 | LOC106569258 | coding | downstream | 300355 | 64341284 ~ 64344020 (+) |
| selenop2 | LOC106569257 | coding | downstream | 305822 | 64346751 ~ 64349881 (+) |
| elovl8a | LOC106569295 | coding | downstream | 310740 | 64351669 ~ 64358704 (+) |
| zswim5 | LOC106569256 | coding | downstream | 392176 | 64433105 ~ 64498150 (+) |
| G734104 | NA | non-coding | upstream | 53617 | 63985328 ~ 63987090 (+) |
| G734048 | NA | non-coding | upstream | 107512 | 63932646 ~ 63933195 (+) |
| G733697 | NA | non-coding | upstream | 237322 | 63802729 ~ 63803385 (+) |
| G733730 | NA | non-coding | upstream | 242741 | 63797726 ~ 63797966 (+) |
| G733729 | NA | non-coding | upstream | 243338 | 63797141 ~ 63797369 (+) |
| G734137 | NA | non-coding | downstream | 3584 | 64044513 ~ 64045112 (+) |
| G734140 | NA | non-coding | downstream | 11402 | 64052331 ~ 64052652 (+) |
| G734143 | NA | non-coding | downstream | 13709 | 64054638 ~ 64054915 (+) |
| G734148 | NA | non-coding | downstream | 23059 | 64063988 ~ 64064191 (+) |
| G734408 | NA | non-coding | downstream | 203821 | 64244750 ~ 64245014 (+) |
| G733571 | LOC106569085 | other | upstream | 491964 | 63547587 ~ 63548743 (+) |
| LOC110530316 | LOC106569082 | other | upstream | 613040 | 63375496 ~ 63430577 (+) |
| LOC118965541 | LOC106569076 | other | upstream | 835811 | 63188433 ~ 63206250 (+) |
| G732350 | NA | other | upstream | 1157759 | 62797701 ~ 62882948 (+) |
| G732052 | NA | other | upstream | 1636516 | 62402949 ~ 62404191 (+) |
| LOC110530334 | LOC106569251 | other | downstream | 505351 | 64546280 ~ 64551340 (+) |
| G734690 | LOC106569249 | other | downstream | 578111 | 64619040 ~ 64620007 (+) |
| LOC110530343 | LOC106569291 | other | downstream | 656384 | 64697289 ~ 64698526 (+) |
| G735047 | NA | other | downstream | 780686 | 64821615 ~ 64822045 (+) |
| G735064 | NA | other | downstream | 789695 | 64830624 ~ 64830903 (+) |
