Gene
RNA
| Item | Value |
|---|---|
| gene id | G734143 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 64054638 ~ 64054915 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: acidic leucine-rich nuclear phosphoprotein 32 family member B-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU833684 | True | 278 | lncRNA | 0.51 | 1 | 64054638 | 64054915 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ccdc24 | LOC106569089 | coding | upstream | 252075 | 63778335 ~ 63802563 (+) |
| LOC110530319 | b4galt2 | coding | upstream | 294124 | 63613362 ~ 63760514 (+) |
| atp6v0b | atp6v0b | coding | upstream | 441918 | 63603198 ~ 63612720 (+) |
| LOC118965542 | NA | coding | upstream | 492878 | 63559656 ~ 63570616 (+) |
| ptch2 | LOC106569083 | coding | upstream | 588228 | 63435359 ~ 63466410 (+) |
| LOC110530325 | LOC106569259 | coding | downstream | 247566 | 64302481 ~ 64336545 (+) |
| LOC110530327 | LOC106569258 | coding | downstream | 286369 | 64341284 ~ 64344020 (+) |
| selenop2 | LOC106569257 | coding | downstream | 291836 | 64346751 ~ 64349881 (+) |
| elovl8a | LOC106569295 | coding | downstream | 296754 | 64351669 ~ 64358704 (+) |
| zswim5 | LOC106569256 | coding | downstream | 378190 | 64433105 ~ 64498150 (+) |
| G734140 | NA | non-coding | upstream | 1986 | 64052331 ~ 64052652 (+) |
| G734137 | NA | non-coding | upstream | 9526 | 64044513 ~ 64045112 (+) |
| G734136 | NA | non-coding | upstream | 13709 | 64040707 ~ 64040929 (+) |
| G734104 | NA | non-coding | upstream | 67548 | 63985328 ~ 63987090 (+) |
| G734048 | NA | non-coding | upstream | 121443 | 63932646 ~ 63933195 (+) |
| G734148 | NA | non-coding | downstream | 9073 | 64063988 ~ 64064191 (+) |
| G734408 | NA | non-coding | downstream | 189835 | 64244750 ~ 64245014 (+) |
| G734443 | NA | non-coding | downstream | 217791 | 64272706 ~ 64273009 (+) |
| G734622 | NA | non-coding | downstream | 443317 | 64498232 ~ 64500952 (+) |
| G734642 | NA | non-coding | downstream | 447431 | 64502346 ~ 64502780 (+) |
| G733571 | LOC106569085 | other | upstream | 505895 | 63547587 ~ 63548743 (+) |
| LOC110530316 | LOC106569082 | other | upstream | 626971 | 63375496 ~ 63430577 (+) |
| LOC118965541 | LOC106569076 | other | upstream | 849742 | 63188433 ~ 63206250 (+) |
| G732350 | NA | other | upstream | 1171690 | 62797701 ~ 62882948 (+) |
| G732052 | NA | other | upstream | 1650447 | 62402949 ~ 62404191 (+) |
| LOC110530334 | LOC106569251 | other | downstream | 491365 | 64546280 ~ 64551340 (+) |
| G734690 | LOC106569249 | other | downstream | 564125 | 64619040 ~ 64620007 (+) |
| LOC110530343 | LOC106569291 | other | downstream | 642398 | 64697289 ~ 64698526 (+) |
| G735047 | NA | other | downstream | 766700 | 64821615 ~ 64822045 (+) |
| G735064 | NA | other | downstream | 775709 | 64830624 ~ 64830903 (+) |
