G734443


Basic Information

Item Value
gene id G734443
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 64272706 ~ 64273009 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU834002
gccggaagagagactgacggaagccccaatcaaacggcaaaactccctccaaaattgagacgtgaattgcggacctctgtccgaaacgacgtctgacggaaggccatgaattctgaaaacattctcgatgatgatttgtgccgtctctttagcagaaggaagcttagcaaggggaatgaaatgagccgccttagagaacctatcgacaaccgtaagaataacagtcttccccgctgacgaaggcagtccggtgacaaaatctaaggcgatgtgagaccacggtcgagagggaataggaagcgac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU834002 True 304 lncRNA 0.50 1 64272706 64273009

Neighbor

gene id symbol gene type direction distance location
ccdc24 LOC106569089 coding upstream 470143 63778335 ~ 63802563 (+)
LOC110530319 b4galt2 coding upstream 512192 63613362 ~ 63760514 (+)
atp6v0b atp6v0b coding upstream 659986 63603198 ~ 63612720 (+)
LOC118965542 NA coding upstream 710946 63559656 ~ 63570616 (+)
ptch2 LOC106569083 coding upstream 806296 63435359 ~ 63466410 (+)
LOC110530325 LOC106569259 coding downstream 29472 64302481 ~ 64336545 (+)
LOC110530327 LOC106569258 coding downstream 68275 64341284 ~ 64344020 (+)
selenop2 LOC106569257 coding downstream 73742 64346751 ~ 64349881 (+)
elovl8a LOC106569295 coding downstream 78660 64351669 ~ 64358704 (+)
zswim5 LOC106569256 coding downstream 160096 64433105 ~ 64498150 (+)
G734408 NA non-coding upstream 27692 64244750 ~ 64245014 (+)
G734148 NA non-coding upstream 208515 64063988 ~ 64064191 (+)
G734143 NA non-coding upstream 217791 64054638 ~ 64054915 (+)
G734140 NA non-coding upstream 220054 64052331 ~ 64052652 (+)
G734137 NA non-coding upstream 227594 64044513 ~ 64045112 (+)
G734622 NA non-coding downstream 225223 64498232 ~ 64500952 (+)
G734642 NA non-coding downstream 229337 64502346 ~ 64502780 (+)
G734627 NA non-coding downstream 238549 64511558 ~ 64565673 (+)
LOC110530334 LOC106569251 non-coding downstream 273669 64546280 ~ 64551340 (+)
G734660 NA non-coding downstream 298109 64571118 ~ 64571356 (+)
G733571 LOC106569085 other upstream 723963 63547587 ~ 63548743 (+)
LOC110530316 LOC106569082 other upstream 845039 63375496 ~ 63430577 (+)
LOC118965541 LOC106569076 other upstream 1067810 63188433 ~ 63206250 (+)
G732350 NA other upstream 1389758 62797701 ~ 62882948 (+)
G732052 NA other upstream 1868515 62402949 ~ 62404191 (+)
G734690 LOC106569249 other downstream 346031 64619040 ~ 64620007 (+)
LOC110530343 LOC106569291 other downstream 424304 64697289 ~ 64698526 (+)
G735047 NA other downstream 548606 64821615 ~ 64822045 (+)
G735064 NA other downstream 557615 64830624 ~ 64830903 (+)

Expression


Co-expression Network