G734690 (LOC106569249)


Basic Information

Item Value
gene id G734690
gene name LOC106569249
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 64619040 ~ 64620007 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU834286
TAACAGTAGACCCTCTTGGGCATGATGGGAGCTAAGTGTAGGCTATGAGGTACGTGCAGTCAGAAGTTAACACACGTAGGCTAATGGGCTGCAACTCTCTTCATTCCAAAGAGCATATCAAACGCTTACCTCCATATCTGTCCAAGCTGCAAGATGTGGGTGACGGATTGCGCGGACCATATGAATACTGAACAGGACGCCGACCTTTTCTTATTAGTCGGGGTTGCcgtgctgctgttgctgttggtTGTGGTGTTGCTCTTGCTCGCGGTGGACGCCTGTCTTTGAGGTGTGGACGGTTGGGCGCCCACATCTCCATGTGAAGCAGAACCGCTCAGCAGCTTCCCGTCCATGTGGGATGAGCAGTTTGCCGCACCGGTGGCATTGGAGCCCTCGTCGGTGCTGAAATCGTGGACGAACCACCGAAAACTAAAGACTTGGACGGAGAACGACCCTAGCACAACAAAAAATAGCGTGAGCCCGAACCACCAGTAGTCGCGACGGAGGTAATAGTCGACAGAAAGCCAAATGTCGGTGCCTACATCGGCGAAATACACCACCACTGCAGCGAGAATCCATAGACAGTCCCATATCGTGTATTTTGTTTGCTGCTCTCTGCCAAGGCGAAGACATGTCGAATTAGAACCACAGCACCGTGATTCCCCATTCACGAATTCCCCATCCCCGGTTCCCGAATCCGGCTGCGATCCTGGAACGAGTCCCTGTACTGAGCCTGAGTGGTCCGAATTCTGCAAAGGCGTGAACGCTACATCGCTCTTTCTAATTTTTAATACCCCATCAGATTTAGCGGCCATTATCGTAGCTTTTTCTTTCTCCTCCAGCCAACACCGTCTTTTCTCCTCCCGTTTTCTTGTCTCCCCCTCGGCTTCTGTGTTCCAGGCGAAGAGATACTGGGCTGGGCGACCTCCTCTTCCGCCAGCTACAGCGCCGCCTGTTCATAACAAAGC
>TU834284
ATCTGTCCAAGCTGCAAGATGTGGGTGACGGATTGCGCGGACCATATGAATACTGAACAGGACGCCGACCTTTTCTTATTAGTCGGGGTTGCcgtgctgctgttgctgttggtTGTGGTGTTGCTCTTGCTCGCGGTGGACGCCTGTCTTTGAGGTGTGGACGGTTGGGCGCCCACATCTCCATGTGAAGCAGAACCGCTCAGCAGCTTCCCGTCCATGTGGGATGAGCAGTTTGCCGCACCGGTGGCATTGGAGCCCTCGTCGGTGCTGAAATCGTGGACGAACCACCGAAAACTAAAGACTTGGACGGAGAACGACCCTAGCACAACAAAAAATAGCGTGAGCCCGAACCACCAGTAGTCGCGACGGAGGTAATAGTCGACAGAAAGCCAAATGTCGGTGCCTACATCGGCGAAATACACCACCACTGCAGCGAGAATCCATAGACAGTCCCATATCGTGTATTTTGTTTGCTGCTCTCTGCCAAGGCGAAGACATGTCGAATTAGAACCACAGCACCGTGATTCCCCATTCACGAATTCCCCATCCCCGGTTCCCGAATCCGGCTGCGATCCTGGAACGAGTCCCTGTACTGAGCCTGAGTGGTCCGAATTCTGCAAAGGCGTGAACGCTACATCGCTCTTTCTAATTTTTAATACCCCATCAGATTTAGCGGCCATTATCGTAGCTTTTTCTTTCTCCTCCAGCCAACACCGTCTTTTCTCCTCCCGTTTTCTTGTCTCCCCCTCGGCTTCTGTGTTCCAGGCGAAGAGATACTGGGCTGGGCGACCTCCTCTTCCGCCAGCTACAGCGCCGCCTGTTCATAACAAAGC

Function

NR:

description
XK-related protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU834286 False 968 TUCP 0.53 1 64619040 64620007
TU834284 True 833 TUCP 0.54 1 64619175 64620007

Neighbor

gene id symbol gene type direction distance location
LOC118965544 NA coding upstream 19490 64598087 ~ 64599550 (+)
LOC110530334 LOC106569251 coding upstream 67834 64546280 ~ 64551340 (+)
zswim5 LOC106569256 coding upstream 120890 64433105 ~ 64498150 (+)
elovl8a LOC106569295 coding upstream 260336 64351669 ~ 64358704 (+)
selenop2 LOC106569257 coding upstream 269159 64346751 ~ 64349881 (+)
buc LOC106569294 coding downstream 21114 64641121 ~ 64644702 (+)
LOC110530338 LOC106569292 coding downstream 29551 64649558 ~ 64653472 (+)
LOC110530342 LOC106569247 coding downstream 46437 64666444 ~ 64667954 (+)
LOC110530343 LOC106569291 coding downstream 77282 64697289 ~ 64698526 (+)
cdh12a LOC106569243 coding downstream 340177 64960058 ~ 64994487 (+)
G734689 NA non-coding upstream 2193 64616615 ~ 64616847 (+)
G734685 NA non-coding upstream 4714 64613811 ~ 64614326 (+)
G734681 NA non-coding upstream 17184 64601551 ~ 64601856 (+)
G734674 NA non-coding upstream 28617 64590118 ~ 64590423 (+)
G734686 NA non-coding downstream 91923 64711930 ~ 64712842 (+)
G734781 LOC106569244 non-coding downstream 138506 64758513 ~ 64760663 (+)
G734805 NA non-coding downstream 178357 64798364 ~ 64798583 (+)
G735046 NA non-coding downstream 200288 64820295 ~ 64820583 (+)
G733571 LOC106569085 other upstream 1070297 63547587 ~ 63548743 (+)
LOC110530316 LOC106569082 other upstream 1191373 63375496 ~ 63430577 (+)
LOC118965541 LOC106569076 other upstream 1414144 63188433 ~ 63206250 (+)
G732350 NA other upstream 1736092 62797701 ~ 62882948 (+)
G735047 NA other downstream 201608 64821615 ~ 64822045 (+)
G735064 NA other downstream 210617 64830624 ~ 64830903 (+)
si:ch211-207d6.2 kiaa1217 other downstream 704928 65300995 ~ 65386540 (+)
G735512 NA other downstream 782216 65402223 ~ 65403099 (+)

Expression


Co-expression Network