G735880



Basic Information


Item Value
gene id G735880
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 64990301 ~ 65040241 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU835604
attatggggtattttgtgtagatggtgagaaaaaacatatacacttgaagttggaagtttacatttccttaggttggagtcattaaaactagtttttcaaccactccacacattttttgttaacaaactatagttttgttcaagtcgattaggacatcaactttgtgcatgcCACAAGtaattcaacaattgtttacagaaagatgatttcacttacaattcactgtatcacaattccagtggtcagagtttacatacactaagttggctgtgcctttaaagagcttggataattccagaaaatgatgtcatggctttagaagcttctgattggctaattgacatcatttcattcaattggaggtgtacctgggatgtatttcaaggcctacctacaaactcagtgcctctttgcttgacatcatgggaaaatcaaaataaatttgccaaaacctcagaaaaaaagttgtagacatccacagaagtctggttcatccttgggagcaatttccaaacgtctgaaggtaccacgttcatctgtacaaacaatagtacgcaagtataaacaccatgggaccacgcagccatcatgccgttcagagatgaacgtactttggcgtgaaaagtgcaaatcaatcccagaacaacagtaaaggaccccgtgaagatgctggaggaaacaggtacaaaagtatctatatccacagtaaaacaagtcctatatcgacataacctgaaaggccactcagcaaggaagaagccactgctccaaaaccaccataacaaatccagactacgttttgcaactgcacatgtgcacaaagatcgtactttttggagaaatgtcctctgctctgaagaaacaaaaatagaactggttggccataatgaccattgttatgtttgaaggaaaaagggggaggcttgcaagccgaagaacaccatcccaaccgtgaagcacgagggaggcagcatcatgttgtgggggtgctttgctacaggagggactggtgcacttcacaaaatagatggcatcatgagggaggaaaatgatgtggatatattgaagcaacatctcaaaatattagtcaggaagttaaagcttgttcacaaatgggtcttccaaatgaacaatgaccccaagcatacttccaaagttgtgacaaaatggcttaaggacaacaaagtcaaggtattggagtggccacaaagccctgacctcaatcctataaaaagtgtgtggtcagaactgaaaaagcgtgtgcgagcaaggaggcctacaaacctgacattagctctgtcaggaggaatgggccaaaattcacccaacttattgtgggaagcttgttgaaggctactcgagatgtttgacccaagttaaacaatttaaaggcaatgctaccaaatactaattgagtgtatgtaaacttccgacttcaactgtatctagaaTGTCAGTTTTCC

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU835604 True 1464 TUCP 0.41 3 64990301 65040241
Loading

Neighbor


gene id symbol gene type direction distance location
cdh6 LOC106569244 coding downstream 196128 64758400 ~ 64794173 (-)
c8h5orf22 cssa14h5orf22 coding downstream 270427 64711467 ~ 64719874 (-)
LOC110530341 LOC106569246 coding downstream 304647 64669470 ~ 64685654 (-)
LOC110530340 LOC106569246 coding downstream 324595 64657845 ~ 64665706 (-)
LOC110530336 LOC106569248 coding downstream 349365 64630945 ~ 64640936 (-)
cahz LOC100135827 coding upstream 89733 65129974 ~ 65135673 (-)
c8h10orf67 cssa14h10orf67 coding upstream 229755 65269996 ~ 65290810 (-)
paxip1 LOC106569237 coding upstream 349307 65389548 ~ 65408613 (-)
cnpy1 LOC106569234 coding upstream 385726 65425967 ~ 65447350 (-)
shhb LOC106569233 coding upstream 443419 65483660 ~ 65486476 (-)
G735863 NA non-coding downstream 23176 64966805 ~ 64967125 (-)
G735853 NA non-coding downstream 34884 64955134 ~ 64955417 (-)
G735849 NA non-coding downstream 39327 64950747 ~ 64950974 (-)
G735839 NA non-coding downstream 47274 64942729 ~ 64943027 (-)
G735830 NA non-coding downstream 55034 64935036 ~ 64935267 (-)
G735971 NA non-coding upstream 82741 65122982 ~ 65126162 (-)
G736049 LOC106569241 non-coding upstream 210609 65250850 ~ 65251189 (-)
G736134 NA non-coding upstream 342987 65383228 ~ 65386534 (-)
G736188 NA non-coding upstream 432252 65472493 ~ 65472965 (-)
G736190 NA non-coding upstream 434748 65474989 ~ 65475294 (-)
LOC110530961 dhx9 other downstream 2805121 62165849 ~ 62185180 (-)
G731764 NA other downstream 2942182 62045035 ~ 62048119 (-)
LOC110530228 LOC106569007 other downstream 7126424 57858233 ~ 57864165 (-)
G726900 NA other downstream 7143612 57820047 ~ 57846689 (-)
G726885 NA other downstream 7178879 57805388 ~ 57811422 (-)
G736216 NA other upstream 477926 65518167 ~ 65528583 (-)
G736841 LOC106569214 other upstream 1060855 66101096 ~ 66101627 (-)
LOC110530385 LOC106569212 other upstream 1153413 66192359 ~ 66210028 (-)
G737449 LOC106569204 other upstream 1518955 66559196 ~ 66560517 (-)
G737422 LOC106569284 other upstream 1673452 66713693 ~ 66714496 (-)

Expression


G735880 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
End of interactive chart.

G735880 Expression in each Bioproject

Bar chart with 21 bars.
G735880 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 75.
End of interactive chart.

Co-expression Network