G735431 (cssa14h10orf67)


Basic Information

Item Value
gene id G735431
gene name cssa14h10orf67
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 65270075 ~ 65275313 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU835112
TAGACTATATAGGTTGAATAAAAGATGGTGCAAGGTGTaaatcaataatgacaaatgcatatattattataattgGAAGGGATTGTATAATTTGCAGACAGTGGGTCTATTCAACTTATGCTATAAACAACCAGTTTTTCACATTCTATTCCAAAGAgttgaatcaaatggtaaagctTGAACTGAGTAGTTCTGTACTAAGTGACCATAAACTTGGGGACTTGTTAAGATGGCTGAGAGCCATGGTGTTGGGAAGGTTTCCAGCCAGCACTTACTCTGATTAACCCTGTATGCTGAAACTCTGCTGGACTCCACCATACCAGCAATTGCTATTTATCCAGCATTTAATGAAAGCAATTACTTTTAAGTCCAACAAAAATTCCCCACTTTGTTGTCTTACAACCAATGCAGAAGCTCTGAAAGAGGCAAACGTCCTGAGTAAGAAACCCTCCTGAGACTTTTAAGGGACATAATATATATGCCAGCAGTTTCTATGACAACATGGTTACCCTACAATCCATAGTGTTTTACTGAATGACCGGCTAGAATGTAAAAGTGTCTTATTAAAGTCACCAAATGATGGACTGTTGAAAATAACAAGAAGTTAATGTATAATCACATAATGTTTATAAAGAGGACTGTGAGACAGTGAAAGAGTCATATTCTAACCATCATCAGTAATAAATGACATCCAATTGAAGGAGAAATTGCTAATTGATTTTAAGCCTGTCGTTTAATGTCATGAGGTTTGGCATGAAAGGGGCAGGCAGCAGCGGACTGTGGGGGTTTGGCTTTTTTTCTGAATGCAGCCTGGGAAAGTGAGATGTGGCTGGCTGGATTAGTGGTGTACCACAGTTTCGCAGGCCCCCCAAGCAAGGTCTGAGCAAGCCTCCCCCACAAAAAAACTGTTAacttcctacaattctacacattttgccaatgAGGATGAAAGAAAATGTTTCTGTTTTAAAACTGATTTACTGCAACTGTACAAATATtgcatggggcagagagaaaaattaGGCAGACTAATTCTTatcttttttcactaattggtcttttgaccaatagatcagctctgaaaaagatctgatgtgaaaagatctgatgtgattggtcaaaagaccaattagtggggaaaagatcagaattgggctgcctatgTAAATGCAGCCTTAGGCTACTGAAATGCATCAGATATGTATGTAACTTTCTAATTTGTTTAATTGTCTGTAAAGCATAAATGTTGGTATAGGTTTGTCATTTTGAAGGGGTGCAGATTGCAGATGTGAGGGATGCTCTTTGCCTGGTATGGGACAGAAGGCAAGGAAGAGGAAGAATTCCACACAGCTCCTCTTCATCTCCTGATTCCATCTGGGATTCTGAACAATCTGTTCTTCTGCCACTCAACACACTGATGTCCATGATCTCACCGGTTCTGTCCATCTTCTGAAAACCTCCAGTACCTATGTTGGGCAGAAGTGTCCCTGCATAGCTGCTCGGCATTTTGAATCCATTGTACACAGGACTTTGGTAAGAACCAGCACTGTCCATCTACAGGAAATAAAATAGACATTCATAATACAAGATATCTTTATAATTGGAGCAGGCTACTGTTTTCAATGGGTTGCATTGATGCTTAGAGTGATAGGTTTGCAGTGTGATCAGTGTATAGCACTGTGCAGCTCACATCCATAGCATTAGAATCTTGACACCAGTGAGCTTTTAGAGAAACATCTTTGGCTTTCATCGTAACTGTCTTTCTAATGATTGACTGCTCATGGTGAACAGCCATGTGTGGAAAAGAGggggaaacaaacaaaaaagccgGACCCAAACCTATAAATATTCTTAAGCAACATCCAATGAAGGACTAAATGACGGGCTTCATGGGGCTGCACCTGTTCAACTCTGATCTGTGTGCTCTGATGTACccatttgaaaaataagactgggtgtgtgtgtgcatgtgtgggtgtgtgtgtgtatattacacAAGTGTTGGTTTCCTCTGGTGATTGAGCCATGGAATTGGCTGACAAAAATCATGCCAAAGCCCATGTAATTGTTTGAATTTTATACTCAGTGAAATGTACTGTATCCCTACTACATGCTCTTTTCAGATCAATGTACTGCCCTTATATTAATACATTTGGATAAAGGTACCTCTTTACATGCACTATCCCTAAAGATCCATCCTAAAATCTCACTATGAATGGTTTGTTCCTCACCATGTAGTTGACTGAGGCATGTTGCAGTGAAGCTGCCTGCCGCTGTAACGTCTGTCGCAAGAACATCTCATCTTTGATGGCATGGAAACTTACAATGGATGTTTG

Function

NR:

description
uncharacterized protein C10orf67 homolog, mitochondrial isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU835112 True 2336 lncRNA 0.40 3 65270075 65275313

Neighbor

gene id symbol gene type direction distance location
LOC110529128 LOC106569290 coding upstream 7154 65261636 ~ 65262921 (+)
dlgap1a LOC106569241 coding upstream 16102 65142215 ~ 65253973 (+)
cdh18a LOC106569242 coding upstream 183253 65007887 ~ 65086822 (+)
cdh12a LOC106569243 coding upstream 275588 64960058 ~ 64994487 (+)
LOC110530343 LOC106569291 coding upstream 571549 64697289 ~ 64698526 (+)
si:ch211-207d6.2 kiaa1217 coding downstream 25682 65300995 ~ 65386540 (+)
LOC110530354 LOC106569236 coding downstream 140963 65416276 ~ 65421979 (+)
LOC110530357 LOC106569232 coding downstream 236150 65511463 ~ 65520143 (+)
LOC110530359 LOC106569230 coding downstream 286380 65561693 ~ 65587630 (+)
LOC110530360 tmm70 coding downstream 324018 65599331 ~ 65602141 (+)
G735303 LOC100135827 non-coding upstream 127485 65058158 ~ 65142590 (+)
G735243 NA non-coding upstream 307474 64962299 ~ 64962601 (+)
G735242 NA non-coding upstream 307855 64961995 ~ 64962220 (+)
G735230 NA non-coding upstream 323019 64946856 ~ 64947056 (+)
G735498 NA non-coding downstream 102456 65377769 ~ 65378118 (+)
G735499 NA non-coding downstream 114288 65389601 ~ 65390041 (+)
G735530 NA non-coding downstream 152899 65428212 ~ 65433525 (+)
G735537 NA non-coding downstream 163785 65439098 ~ 65442283 (+)
G735538 NA non-coding downstream 172071 65447384 ~ 65447630 (+)
G735064 NA other upstream 439172 64830624 ~ 64830903 (+)
G735047 NA other upstream 448030 64821615 ~ 64822045 (+)
G734690 LOC106569249 other upstream 650068 64619040 ~ 64620007 (+)
LOC110530334 LOC106569251 other upstream 718935 64546280 ~ 64551340 (+)
G735512 NA other downstream 126910 65402223 ~ 65403099 (+)
LOC110530364 LOC106569228 other downstream 391553 65659289 ~ 65670369 (+)
si:ch211-106n13.3 LOC106569214 other downstream 848895 66100360 ~ 66125932 (+)

Expression


Co-expression Network