G735499


Basic Information

Item Value
gene id G735499
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 65389601 ~ 65390041 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU835191
GGAACATTTTGACAATACAATAAAACATGTTAAAAtccataatttaaacattcagtccacaaaaataacaaagatgtatgtatgtattattaACGGTTGTTACAAAAAGCTACAAAACGACCGATTATCTATCCACAGTGTACAAAATCTTGCAAAATATCAAGGGTAGTGTGACTGTACATTGCAACTTGTTTTTAGCCTTCCTTGCTGCCTCCTCATCTTCACCTTCTTGTCGTCGCCATCATGTGAATTTATATGATTCATAATCCATGTTCTGTGTCAATACACCAGTCAATATAAACTCAGCATTGTGAGTGTC

Function

NR:

description
PAX-interacting protein 1-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU835191 True 319 lncRNA 0.34 2 65389601 65390041

Neighbor

gene id symbol gene type direction distance location
si:ch211-207d6.2 kiaa1217 coding upstream 3061 65300995 ~ 65386540 (+)
LOC110529128 LOC106569290 coding upstream 126680 65261636 ~ 65262921 (+)
dlgap1a LOC106569241 coding upstream 135628 65142215 ~ 65253973 (+)
cdh18a LOC106569242 coding upstream 302779 65007887 ~ 65086822 (+)
cdh12a LOC106569243 coding upstream 395114 64960058 ~ 64994487 (+)
LOC110530354 LOC106569236 coding downstream 26235 65416276 ~ 65421979 (+)
LOC110530357 LOC106569232 coding downstream 121422 65511463 ~ 65520143 (+)
LOC110530359 LOC106569230 coding downstream 171652 65561693 ~ 65587630 (+)
LOC110530360 tmm70 coding downstream 209290 65599331 ~ 65602141 (+)
pi15b LOC106569289 coding downstream 264398 65654439 ~ 65657897 (+)
G735498 NA non-coding upstream 11483 65377769 ~ 65378118 (+)
G735431 cssa14h10orf67 non-coding upstream 114288 65270075 ~ 65275313 (+)
G735303 LOC100135827 non-coding upstream 247011 65058158 ~ 65142590 (+)
G735243 NA non-coding upstream 427000 64962299 ~ 64962601 (+)
G735242 NA non-coding upstream 427381 64961995 ~ 64962220 (+)
G735530 NA non-coding downstream 38171 65428212 ~ 65433525 (+)
G735537 NA non-coding downstream 49057 65439098 ~ 65442283 (+)
G735538 NA non-coding downstream 57343 65447384 ~ 65447630 (+)
G735569 LOC105024267 non-coding downstream 94979 65485020 ~ 65485307 (+)
G735570 NA non-coding downstream 96740 65486781 ~ 65487147 (+)
G735064 NA other upstream 558698 64830624 ~ 64830903 (+)
G735047 NA other upstream 567556 64821615 ~ 64822045 (+)
LOC110530343 LOC106569291 other upstream 691732 64697289 ~ 64698526 (+)
G734690 LOC106569249 other upstream 769594 64619040 ~ 64620007 (+)
G735512 NA other downstream 12182 65402223 ~ 65403099 (+)
LOC110530364 LOC106569228 other downstream 276825 65659289 ~ 65670369 (+)
si:ch211-106n13.3 LOC106569214 other downstream 734167 66100360 ~ 66125932 (+)
G737194 LOC106569203 other downstream 1264621 66654662 ~ 66655753 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) G11823 NA non-coding NC_056700.1 CM032069.1 13994791 ~ 13995373 (+)