G735530


Basic Information

Item Value
gene id G735530
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 65428212 ~ 65433525 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU835224
AATTTTAGGGCATTGGATCCCTCTGGGCCGTCAAACTTGAAATTGTTAAAATCAGGAAAATCCCCAGCATCAGAACTTCTTGGAGCAAATCTTTTGTATTGTTTTATCTTGGTGTCTGGGTCCACATGAAGAGCATAGTCACTCATGCTACCACAAACTCCATCCAGAAGCTCACTCAAGTTGGCCTCAGACCTAGCAAGAGGGACCTTTTATCAGTCAGGCTCCCATCAGGGTTGAGTCTGAAGCCTCCCACATGGATTGTCTTCTTCGGATCAATCTGACTGATTGAATAATTGAGCTCATCAACAATAGCCCTGCATGCTAAAAAAAACAGACATAGATTAGAACAATCCACAGCACTCATTTACTATAAAACAAGTATTTATAGATCCATATTATGCCCACAGCTAGCGAAAAGCAAAAGTAAAACTACAATAAAATTATTTCTCATGAAATAAGCTTGATAGAAATGTTTTGACAATACAGGGTGCACACTAGAAACAAAAGTAAATAAGTCATTGTGTATGCAGAAC

Function

NR:

description
protein canopy-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU835224 True 533 lncRNA 0.39 2 65428212 65433525

Neighbor

gene id symbol gene type direction distance location
LOC110530354 LOC106569236 coding upstream 6233 65416276 ~ 65421979 (+)
si:ch211-207d6.2 kiaa1217 coding upstream 41672 65300995 ~ 65386540 (+)
LOC110529128 LOC106569290 coding upstream 165291 65261636 ~ 65262921 (+)
dlgap1a LOC106569241 coding upstream 174239 65142215 ~ 65253973 (+)
cdh18a LOC106569242 coding upstream 341390 65007887 ~ 65086822 (+)
LOC110530357 LOC106569232 coding downstream 77938 65511463 ~ 65520143 (+)
LOC110530359 LOC106569230 coding downstream 128168 65561693 ~ 65587630 (+)
LOC110530360 tmm70 coding downstream 165806 65599331 ~ 65602141 (+)
pi15b LOC106569289 coding downstream 220914 65654439 ~ 65657897 (+)
LOC110530364 LOC106569228 coding downstream 225764 65659289 ~ 65670369 (+)
G735499 NA non-coding upstream 38171 65389601 ~ 65390041 (+)
G735498 NA non-coding upstream 50094 65377769 ~ 65378118 (+)
G735431 cssa14h10orf67 non-coding upstream 152899 65270075 ~ 65275313 (+)
G735303 LOC100135827 non-coding upstream 285622 65058158 ~ 65142590 (+)
G735243 NA non-coding upstream 465611 64962299 ~ 64962601 (+)
G735537 NA non-coding downstream 5573 65439098 ~ 65442283 (+)
G735538 NA non-coding downstream 13859 65447384 ~ 65447630 (+)
G735569 LOC105024267 non-coding downstream 51495 65485020 ~ 65485307 (+)
G735570 NA non-coding downstream 53256 65486781 ~ 65487147 (+)
G735573 NA non-coding downstream 58327 65491852 ~ 65492149 (+)
G735512 NA other upstream 25113 65402223 ~ 65403099 (+)
G735064 NA other upstream 597309 64830624 ~ 64830903 (+)
G735047 NA other upstream 606167 64821615 ~ 64822045 (+)
LOC110530343 LOC106569291 other upstream 730343 64697289 ~ 64698526 (+)
si:ch211-106n13.3 LOC106569214 other downstream 690683 66100360 ~ 66125932 (+)
G737194 LOC106569203 other downstream 1221137 66654662 ~ 66655753 (+)
kncn kncn other downstream 1266161 66699211 ~ 66704200 (+)

Expression


Co-expression Network