G736477


Basic Information

Item Value
gene id G736477
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 65910066 ~ 65911742 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU836304
ACAAATTGTCAGCAAAGATAACGTGTaatgtaacttatttgaaaagtctttactttattacattgctgaacatgttcttaacatttgtcataattcaTTAACACAATTAATTTGTATCTGCTGTTGTCGGACTTCGGCTACATATTTTCccccattttcttcaaatctgaaaactttgtgaagccacgcccattttctgaagatataattatgggccctaaaagcacgAAAATAGTATCCACTGcttgtatacttcgtattttggcGAATGTAGTACAACATCTGGGAACTTTtgacatactaactatatccatactatgaccaataagcatactacatcCTCAAGTTACATCATAAATGGTTATGGTTaatatgagtattcgaacacggCTATGGATTATGTGTGCCATtccgagggtgaatgggcaagacaaaatatttaagtgcctttgaaagggatatggtagtaggtgccaggcgcactggtttgagtgtgtaaagaactgcaacgctgctgggtttttttcacacacagtttcccgtgtgcatcaagaattgtccaccacccaaaggacatccagccaacttgacacatcaCTTTGGGAaggattggagtcaacatgggccagcatgcctgtggaacgctttcgaccccttgtagattccatgccccgatgaattgaggctgttctgagggtaaaaggggttgcaactcaatattaggaaggtgttcctaatgtattgtacactcagtgtagttaGTCTATCATTATTTTATAGCAAGGGTGCTCAACTACTATTTGAGACGGTCCAGTGACACAAATatcctaggtggcaaaggtccggAGGGATATCGTCCTTTATCAGCGCTGTGGTATGGCGTAGTAACAAACATAGTTGTCTACGACTTAGGAAACATGACGTTATATAAAATGTgcattaaatacattaaataaattaaatgagACGAATAACTTGAATTAATTACAACATCTTTCGAATTTAACATTGCTGAAGAACAAAAGTGGTTGCATAATTGTCTATGCAAAAAGTGCACTCTGAACCAAGTGCATGTTTTCTGGAGAACAAAGGATGGCTTAACAAACATAATCTGAATGCACAGAATACCACTGTGGGCCATGCAATATTCTTGTATAAGTCACTCTGGGCCTTGCCATTGCATCAATGAGAGAAATTATACTTTCTGTCTCCTGCCAAGGCATTGAACTTTGGCACAAATGGTGTGAGAGCCACTCTGAGACACTGGTGCAGGTGTTCATTGGTGAGCCAGGTGCagtatttgtttttaataaaGTTCATTGTGGAGAAGGCTGATTCACAGCTGTATGTGGAGCCAAATGGTCAGGATGTATAGTGCCAGtttcttgagcacagggacaTCAGCTGCAGGCACAATCTTTCCCCAGAAAATAACAATGTCACAATCACCAGCCTGCACATTCAAAGTCACATTTTCTTGCAGCTCTATCAACTCTATTTCTGTGATGTAACATCTACCCATCTGAAGATCTGTTTTTCTTCTTCTGACAACTTTGTCACATTTGTCACATGCATTTCATTAGCTGTGGATGAATCAACAGATAACACTGATAATGCCCAGCTTCTGTGATGCAAGGTAAAGGAGCAATAAAGATTTTATGGTTGCTCCAACCAACA

Function

NR:

description
PREDICTED: general transcription factor II-I repeat domain-containing protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU836304 True 1677 lncRNA 0.40 1 65910066 65911742

Neighbor

gene id symbol gene type direction distance location
LOC110529132 LOC106569221 coding upstream 2847 65904184 ~ 65907219 (+)
trnaa-ugc-27 NA coding upstream 104951 65805045 ~ 65805115 (+)
LOC110529130 LOC106569225 coding upstream 174692 65730055 ~ 65735374 (+)
LOC110530367 LOC106569226 coding upstream 190080 65703263 ~ 65719986 (+)
LOC110530365 LOC106569227 coding upstream 229684 65676827 ~ 65680382 (+)
LOC110530371 NA coding downstream 6556 65918298 ~ 65920176 (+)
LOC110530370 LOC106569219 coding downstream 19293 65931035 ~ 66005474 (+)
LOC110530372 LOC106569218 coding downstream 99009 66010751 ~ 66027208 (+)
mcm6l LOC106569286 coding downstream 123313 66035055 ~ 66040719 (+)
LOC110530377 LOC106569285 coding downstream 130492 66042234 ~ 66064749 (+)
G736466 NA non-coding upstream 13026 65896803 ~ 65897040 (+)
G736463 NA non-coding upstream 14443 65895189 ~ 65895623 (+)
G735705 NA non-coding upstream 134587 65747776 ~ 65775479 (+)
G735678 NA non-coding upstream 159153 65688706 ~ 65750913 (+)
G735656 NA non-coding upstream 265015 65644826 ~ 65645051 (+)
G736562 NA non-coding downstream 161583 66073325 ~ 66073533 (+)
G736572 NA non-coding downstream 185943 66097685 ~ 66097913 (+)
G736575 NA non-coding downstream 187725 66099467 ~ 66099675 (+)
LOC110530364 LOC106569228 other upstream 241971 65659289 ~ 65670369 (+)
LOC110530360 tmm70 other upstream 308169 65599331 ~ 65602141 (+)
G735512 NA other upstream 506967 65402223 ~ 65403099 (+)
si:ch211-207d6.2 kiaa1217 other upstream 561569 65300995 ~ 65386540 (+)
G735064 NA other upstream 1079163 64830624 ~ 64830903 (+)
si:ch211-106n13.3 LOC106569214 other downstream 212466 66100360 ~ 66125932 (+)
G737194 LOC106569203 other downstream 742920 66654662 ~ 66655753 (+)
kncn kncn other downstream 787944 66699211 ~ 66704200 (+)
G737234 gs02 other downstream 886831 66798573 ~ 66802080 (+)
G737783 NA other downstream 1258725 67170467 ~ 67215629 (+)

Expression


Co-expression Network