G736578



Basic Information


Item Value
gene id G736578
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 66107288 ~ 66107524 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU836414
GCACGGGAAGGAACAATGTTCCGCCGCATGTAGAATGAAGCAAGATTGTGCAAAGATGGGTTTTCTGCTCTTGCTTTTGAGGCTGTGCCTTACTCTAAAACATGGCTCTCCAATCCTGTCCCTGGAGAGCTGGCCCTCCTGTAGGCTTTcaatccaaccccagttgtaactaacatGATTCAgattatcaaccagctaattattagaatcagcagagaggaagaggcaagaCGAGAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU836414 True 237 lncRNA 0.47 1 66107288 66107524

Neighbor


gene id symbol gene type direction distance location
exoc3 LOC106569216 coding upstream 34489 66066012 ~ 66072799 (+)
LOC110530377 LOC106569285 coding upstream 42539 66042234 ~ 66064749 (+)
mcm6l LOC106569286 coding upstream 66569 66035055 ~ 66040719 (+)
LOC110530372 LOC106569218 coding upstream 80080 66010751 ~ 66027208 (+)
LOC110530370 LOC106569219 coding upstream 101814 65931035 ~ 66005474 (+)
LOC110530382 ccr3 coding downstream 18489 66126013 ~ 66128501 (+)
LOC110530963 LOC106569213 coding downstream 23578 66131102 ~ 66199626 (+)
LOC110530386 NA coding downstream 32210 66139734 ~ 66141456 (+)
blvra blvra coding downstream 102479 66210003 ~ 66218844 (+)
LOC110530387 LOC106569210 coding downstream 116458 66223982 ~ 66260619 (+)
G736575 NA non-coding upstream 7613 66099467 ~ 66099675 (+)
G736572 NA non-coding upstream 9375 66097685 ~ 66097913 (+)
G736562 NA non-coding upstream 33755 66073325 ~ 66073533 (+)
LOC110530371 NA non-coding upstream 187150 65918298 ~ 65920176 (+)
G736606 NA non-coding downstream 53714 66161238 ~ 66161448 (+)
G736608 NA non-coding downstream 58763 66166287 ~ 66166568 (+)
G736625 NA non-coding downstream 111841 66219365 ~ 66219569 (+)
G736627 NA non-coding downstream 113711 66221235 ~ 66221687 (+)
G736659 NA non-coding downstream 161954 66269478 ~ 66274708 (+)
LOC110530364 LOC106569228 other upstream 439193 65659289 ~ 65670369 (+)
LOC110530360 tmm70 other upstream 505391 65599331 ~ 65602141 (+)
G735512 NA other upstream 704189 65402223 ~ 65403099 (+)
si:ch211-207d6.2 kiaa1217 other upstream 758791 65300995 ~ 65386540 (+)
G735064 NA other upstream 1276385 64830624 ~ 64830903 (+)
si:ch211-106n13.3 LOC106569214 other downstream 16684 66100360 ~ 66125932 (+)
G737194 LOC106569203 other downstream 547138 66654662 ~ 66655753 (+)
kncn kncn other downstream 592162 66699211 ~ 66704200 (+)
G737234 gs02 other downstream 691049 66798573 ~ 66802080 (+)
G737783 NA other downstream 1062943 67170467 ~ 67215629 (+)

Expression



Co-expression Network