G736668 (LOC106599285)


Basic Information

Item Value
gene id G736668
gene name LOC106599285
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 66284208 ~ 66284430 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU836515
TCAGCGGCAATGAAGCCCAGGATGTTTTCGTGGCGAAGCATGACTGTCTGGTAGATCTCGGCCTCACGGAACCACGAGCGCTCCTCCCGGGATGAGAAGATCTTAACGGCCACCTCCTCTCCTCGCCAGCGGCCCCGCCACACCTCCCCGAACCTTCCCTTTCCGATGCTCTCCTGCAGGATGATGGTCCTGGCTATGGTCCTCTGCACCAATAGGGGCAGac

Function

NR:

description
TGF-beta receptor type-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU836515 True 223 lncRNA 0.61 1 66284208 66284430

Neighbor

gene id symbol gene type direction distance location
LOC110530387 LOC106569210 coding upstream 23589 66223982 ~ 66260619 (+)
blvra blvra coding upstream 65364 66210003 ~ 66218844 (+)
LOC110530963 LOC106569213 coding upstream 84582 66131102 ~ 66199626 (+)
LOC110530386 NA coding upstream 142752 66139734 ~ 66141456 (+)
LOC110530382 ccr3 coding upstream 155707 66126013 ~ 66128501 (+)
LOC110530392 LOC106569206 coding downstream 152951 66437381 ~ 66509379 (+)
LOC110530393 LOC106569204 coding downstream 225995 66510425 ~ 66596240 (+)
LOC118965632 NA coding downstream 364204 66648634 ~ 66649552 (+)
LOC110530967 NA coding downstream 386673 66671103 ~ 66672607 (+)
kncn kncn coding downstream 414781 66699211 ~ 66704200 (+)
G736667 NA non-coding upstream 754 66283171 ~ 66283454 (+)
G736665 NA non-coding upstream 3162 66280730 ~ 66281046 (+)
G736664 NA non-coding upstream 4181 66279758 ~ 66280027 (+)
G736663 NA non-coding upstream 6134 66277851 ~ 66278074 (+)
G736662 NA non-coding upstream 7124 66276884 ~ 66277084 (+)
G736669 NA non-coding downstream 1325 66285755 ~ 66286278 (+)
G736671 NA non-coding downstream 7537 66291967 ~ 66293276 (+)
G736678 NA non-coding downstream 19117 66303547 ~ 66303946 (+)
G736679 NA non-coding downstream 20596 66305026 ~ 66305260 (+)
G736680 NA non-coding downstream 21520 66305950 ~ 66306260 (+)
si:ch211-106n13.3 LOC106569214 other upstream 158870 66100360 ~ 66125932 (+)
LOC110530364 LOC106569228 other upstream 616113 65659289 ~ 65670369 (+)
LOC110530360 tmm70 other upstream 682311 65599331 ~ 65602141 (+)
G735512 NA other upstream 881109 65402223 ~ 65403099 (+)
si:ch211-207d6.2 kiaa1217 other upstream 935711 65300995 ~ 65386540 (+)
G737194 LOC106569203 other downstream 370232 66654662 ~ 66655753 (+)
G737234 gs02 other downstream 514143 66798573 ~ 66802080 (+)
G737783 NA other downstream 886037 67170467 ~ 67215629 (+)
G738020 NA other downstream 946752 67231182 ~ 67231913 (+)

Expression


Co-expression Network