G737194 (LOC106569203)


Basic Information

Item Value
gene id G737194
gene name LOC106569203
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 66654662 ~ 66655753 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU837120
GGAAGTCTGCATGTCTGTGGGCATGGGGGGCATGCCAATGGGAGGTGGGGGTCCCATCATCCCATGGGGGCCTGGAGCAGGGTACCCTCCATAGGGACCATAGCCACCATAGTTATAGCTGTTGTACTGGTCATAGCCCCAATGAGGGTAATAGTTCTGGTTGGGTTGTTGATAGTACGGCTGTTGGTAATTGTTGTGGTAGGAGTTGTGGTTCTGGTTGTTATAGCTGTTCATTTTATGGCTCTTGTTCACAGCTATGCTGATCCTGATTGGTTTCGTCCCCAGGCCTGTGGCGTTCTGACACTCATCGATGGCTTTCTTCTGTTCGTTCTCGTCCCCAAACTTGATGAAACCATAACCTCTGCGAGACAAAGCACAACACTAAAACCCTGAGCACACATTCTCTCCGGGCTCACCTTATCATGCTTATCAAACACGTAATTAATTAGAAAACAAAAATGGTATGGTAGAACTGAAACTTGTTGTTTTACTTTTAATATGAAGTAGCATCACTTCAATTGTGAGTTGCTCTTGCTTACCCTATATGGGGAAAACAATGGTTTTAGCATAAATGTCAGAAACAAACCTTTTCCAGTATTTGGGGGAAAATATACCAGCGGTGAAGATACGCAAGACACAGATATGTCGTCTCCACACAATCcaattaaacaaatatattgttAAAAATGTCATGCGATTTTACAATGAATTTAAATGTAATGAAATGTCAGATTAATCCATCTGAAGCAGAAATTACATTCAAATTGTGTTCAAATCAGGTGGTGCATTACCAGCATCACCAAATAACATGACTATGTCTGTTCAGCGCTCATACCTGGAATTACCATACTGATCAGAGACCACTTTCCCTCCTTTGCAGGAAGGGTACTTCTTCAGGAAGAACTGATGGAGCTGGTAGTCATCCACCTCTGAAGACAGATCTCCGACAA

Function

NR:

description
tRNA selenocysteine 1-associated protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU837120 True 950 TUCP 0.43 2 66654662 66655753

Neighbor

gene id symbol gene type direction distance location
LOC118965632 NA coding upstream 5110 66648634 ~ 66649552 (+)
LOC110530393 LOC106569204 coding upstream 58422 66510425 ~ 66596240 (+)
LOC110530392 LOC106569206 coding upstream 145283 66437381 ~ 66509379 (+)
LOC110530387 LOC106569210 coding upstream 394043 66223982 ~ 66260619 (+)
blvra blvra coding upstream 435818 66210003 ~ 66218844 (+)
LOC110530967 NA coding downstream 15350 66671103 ~ 66672607 (+)
kncn kncn coding downstream 43458 66699211 ~ 66704200 (+)
LOC110530397 LOC106569284 coding downstream 56334 66712087 ~ 66721454 (+)
LOC110529133 NA coding downstream 174178 66829931 ~ 66830478 (+)
LOC110530398 LOC106569198 coding downstream 211762 66867515 ~ 66935353 (+)
G737189 NA non-coding upstream 8099 66646339 ~ 66646563 (+)
G737162 NA non-coding upstream 37044 66617366 ~ 66617618 (+)
G737161 NA non-coding upstream 37309 66617085 ~ 66617353 (+)
G737200 NA non-coding downstream 4242 66659995 ~ 66660226 (+)
G737202 NA non-coding downstream 5710 66661463 ~ 66661676 (+)
G737216 NA non-coding downstream 48507 66704260 ~ 66706474 (+)
G737224 NA non-coding downstream 57338 66713091 ~ 66713315 (+)
G737222 NA non-coding downstream 69881 66725634 ~ 66726888 (+)
si:ch211-106n13.3 LOC106569214 other upstream 529324 66100360 ~ 66125932 (+)
LOC110530364 LOC106569228 other upstream 986567 65659289 ~ 65670369 (+)
LOC110530360 tmm70 other upstream 1052765 65599331 ~ 65602141 (+)
G735512 NA other upstream 1251563 65402223 ~ 65403099 (+)
si:ch211-207d6.2 kiaa1217 other upstream 1306165 65300995 ~ 65386540 (+)
G737234 gs02 other downstream 142820 66798573 ~ 66802080 (+)
G737783 NA other downstream 514714 67170467 ~ 67215629 (+)
G738020 NA other downstream 575429 67231182 ~ 67231913 (+)
G738244 NA other downstream 890376 67546129 ~ 67547609 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G28705 NA non-coding CI01000004 null 7647287 ~ 7648021 (+)