G737235


Basic Information

Item Value
gene id G737235
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 66787941 ~ 66794377 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU837169
AAGGGAGGGGACAGTGATGAATCAGCGGAAACACAGGCTGCCGCTGCAAGCTCAGCAAAGAGATCAGTAGGATAATTCGGTATTTCCCCAAGTCCTAGAAGGAGCTTAAATAGATATACAAACATTGAAGAGGATGACATGTTATTAAGTTGTTATCAGTGGAGCAGtcaggtgacctagtggttagagctttgggatTGCTCATTTGAATCCCCATGCTGAAaagaggacctgagccctaggcccatgcctcaggactacctggcatgatgattcCTTTCTGTCCccgtccacctggccgtgctgctgctccagttttaactgttctgcctgcggctatggaaccctgacctgttcaccggacgtgctacctgtcccagacctattgttttcaactctctagagacagtagGAGCGAtggagatactctcaatgatcggctatgaaaagccaactgacacttactcctgaggacctgagccctaggaccatgccccaggactacctgacatgatgactccttgctgtccccagtccacctggctgtgctgctgctccagtttcaactgttctgccttattattattcgaccatgctgatcatttatgaacatttgaacatcttggccatgttctgttataatctccacccggcacagccagaagaggactggccatcccacatatgctctctctaatgctctctttctttctctctctcggaggacctgagccctaggaccatgccccaggaatacctgacatgatgactccttgctgtccccagtccacctgactgtgctgctgctccagtttcaactattctgccttattattattcgaccatgc
>TU837170
AAGGGAGGGGACAGTGATGAATCAGCGGAAACACAGGCTGCCGCTGCAAGCTCAGCAAAGAGATCAGTAGGATAATTCGGTATTTCCCCAAGTCCTAGAAGGAGCTTAAATAGATATACAAACATTGAAGAGGATGACATGTTATTAAGTTGTTATCAGTGGAGCAGtcaggtgacctagtggttagagctttgggatTGCTCATTTGAATCCCCATGCTGAAaagaggacctgagccctaggcccatgcctcaggactacctggcatgatgattcCTTTCTGTCCccgtccacctggccgtgctgctgctccagttttaactgttctgcctgcggctatggaaccctgacctgttcaccggacgtgctacctgtcccagacctattgttttcaactctctagagacagtagGAGCGAtggagatactctcaatgatcggctatgaaaagccaactgacacttactcctgaggtgctgacctgttgcaccctcgacaactactgtgattattattatttgaccatgctggtcatttatgaacatttgaacatcttggccatgttctgttataatctccacccggcacagccagaagaggactggccacccctcatagcctggttcctctctaggtttcttcctaggtttttggcctttctagggagtttttcctcgcCACCGTGCTTCTAGAAACTTctagaaactttcaaccggttttccccattaagcag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU837169 False 848 lncRNA 0.50 3 66787941 66794377
TU837170 True 732 lncRNA 0.48 2 66787941 66789695

Neighbor

gene id symbol gene type direction distance location
LOC110530397 LOC106569284 coding upstream 66487 66712087 ~ 66721454 (+)
kncn kncn coding upstream 83741 66699211 ~ 66704200 (+)
LOC110530967 NA coding upstream 115334 66671103 ~ 66672607 (+)
LOC118965632 NA coding upstream 138389 66648634 ~ 66649552 (+)
LOC110530393 LOC106569204 coding upstream 191701 66510425 ~ 66596240 (+)
LOC110529133 NA coding downstream 35554 66829931 ~ 66830478 (+)
LOC110530398 LOC106569198 coding downstream 73138 66867515 ~ 66935353 (+)
LOC110530399 LOC106569196 coding downstream 154245 66948622 ~ 66973138 (+)
arhgap21b LOC106569193 coding downstream 181304 66975681 ~ 67054754 (+)
LOC110530401 LOC106599252 coding downstream 496300 67290677 ~ 67430071 (+)
G737222 NA non-coding upstream 61053 66725634 ~ 66726888 (+)
G737224 NA non-coding upstream 74626 66713091 ~ 66713315 (+)
G737216 NA non-coding upstream 81467 66704260 ~ 66706474 (+)
G737202 NA non-coding upstream 126265 66661463 ~ 66661676 (+)
G737200 NA non-coding upstream 127715 66659995 ~ 66660226 (+)
G737300 NA non-coding downstream 33971 66828348 ~ 66828626 (+)
G737663 NA non-coding downstream 147225 66941602 ~ 66941897 (+)
G737720 NA non-coding downstream 275670 67070047 ~ 67070309 (+)
G738026 NA non-coding downstream 439517 67233894 ~ 67234129 (+)
G738037 NA non-coding downstream 444852 67239229 ~ 67239429 (+)
G737194 LOC106569203 other upstream 132188 66654662 ~ 66655753 (+)
si:ch211-106n13.3 LOC106569214 other upstream 662603 66100360 ~ 66125932 (+)
LOC110530364 LOC106569228 other upstream 1119846 65659289 ~ 65670369 (+)
LOC110530360 tmm70 other upstream 1186044 65599331 ~ 65602141 (+)
G737234 gs02 other downstream 4196 66798573 ~ 66802080 (+)
G737783 NA other downstream 376090 67170467 ~ 67215629 (+)
G738020 NA other downstream 436805 67231182 ~ 67231913 (+)
G738244 NA other downstream 751752 67546129 ~ 67547609 (+)
LOC110530413 NA other downstream 1112000 67904516 ~ 67924427 (+)

Expression


Co-expression Network