G738045


Basic Information

Item Value
gene id G738045
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 67242448 ~ 67242852 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU838074
ccaaaacatttcggcagcattgaaggtccccaagaacacagtggtctccatcattcttaaattgaagaagtttggaaccacctaacctcttcctagagcttgcctttatgttagagtggccagacggaagccattactcagtaaaaggcacatgacagcccccttGTAGTTTGTCAAAACGCACCTAAAGGACTGTCAGAcaatgataaacaagattctatggtctgatgaaacaaagattgaactctttgacctgaatgctaagtgtcacgtgtggaggaaacctggcagcatccctacagtgaagcatggtggtggcagcatcatgctgtggggtttttcagcggcagggactgggagactagtcaggattgagggaaagatgaacggagcaaagtacagaaa

Function

NR:

description
Putative transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU838074 True 405 lncRNA 0.46 1 67242448 67242852

Neighbor

gene id symbol gene type direction distance location
arhgap21b LOC106569193 coding upstream 187694 66975681 ~ 67054754 (+)
LOC110530399 LOC106569196 coding upstream 269310 66948622 ~ 66973138 (+)
LOC110530398 LOC106569198 coding upstream 307095 66867515 ~ 66935353 (+)
LOC110529133 NA coding upstream 411970 66829931 ~ 66830478 (+)
LOC110530397 LOC106569284 coding upstream 520994 66712087 ~ 66721454 (+)
LOC110530401 LOC106599252 coding downstream 47825 67290677 ~ 67430071 (+)
LOC110530403 LOC106569190 coding downstream 188001 67430853 ~ 67474302 (+)
LOC110530407 LOC106569186 coding downstream 334993 67577845 ~ 67693642 (+)
LOC110530410 LOC106569184 coding downstream 450965 67693817 ~ 67726942 (+)
LOC110530969 LOC106569181 coding downstream 516532 67759384 ~ 67769486 (+)
G738037 NA non-coding upstream 3019 67239229 ~ 67239429 (+)
G738026 NA non-coding upstream 8319 67233894 ~ 67234129 (+)
G737720 NA non-coding upstream 172139 67070047 ~ 67070309 (+)
G737663 NA non-coding upstream 300551 66941602 ~ 66941897 (+)
G737300 NA non-coding upstream 413822 66828348 ~ 66828626 (+)
G738075 NA non-coding downstream 20269 67263121 ~ 67263369 (+)
G738078 NA non-coding downstream 22254 67265106 ~ 67265334 (+)
G738125 NA non-coding downstream 93837 67336689 ~ 67337361 (+)
G738126 NA non-coding downstream 98345 67341197 ~ 67342012 (+)
G738149 NA non-coding downstream 154028 67396880 ~ 67397112 (+)
G738020 NA other upstream 10535 67231182 ~ 67231913 (+)
G737783 NA other upstream 26819 67170467 ~ 67215629 (+)
G737234 gs02 other upstream 440368 66798573 ~ 66802080 (+)
kncn kncn other upstream 538363 66699211 ~ 66704200 (+)
G737194 LOC106569203 other upstream 586695 66654662 ~ 66655753 (+)
G738244 NA other downstream 303277 67546129 ~ 67547609 (+)
LOC110530413 NA other downstream 663525 67904516 ~ 67924427 (+)
G739648 NA other downstream 1615531 68858383 ~ 68858753 (+)
G739670 NA other downstream 1660513 68903365 ~ 68906965 (+)
G739708 NA other downstream 1761485 69004337 ~ 69005116 (+)

Expression


Co-expression Network