G738260


Basic Information

Item Value
gene id G738260
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 67575871 ~ 67576087 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU838316
accatagtccctgtgcccaagaacacaaaggtaacctgtctaaatgactactgacccatagcactcatgtctgtagtcatgaagtcatttgaaaggctggtcaaggctcacaccaacaccattatcccagaaaccctagacccactccaatttgcattcagccccaacagatccacagatgatgcaatctctattgcactccacgctgccctatccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU838316 True 217 lncRNA 0.48 1 67575871 67576087

Neighbor

gene id symbol gene type direction distance location
LOC110530403 LOC106569190 coding upstream 101569 67430853 ~ 67474302 (+)
LOC110530401 LOC106599252 coding upstream 145800 67290677 ~ 67430071 (+)
arhgap21b LOC106569193 coding upstream 521117 66975681 ~ 67054754 (+)
LOC110530399 LOC106569196 coding upstream 602733 66948622 ~ 66973138 (+)
LOC110530398 LOC106569198 coding upstream 640518 66867515 ~ 66935353 (+)
LOC110530407 LOC106569186 coding downstream 1758 67577845 ~ 67693642 (+)
LOC110530410 LOC106569184 coding downstream 117730 67693817 ~ 67726942 (+)
LOC110530969 LOC106569181 coding downstream 183297 67759384 ~ 67769486 (+)
LOC110530413 NA coding downstream 328429 67904516 ~ 67924427 (+)
LOC110530418 LOC106569175 coding downstream 609820 68185907 ~ 68198975 (+)
G738149 NA non-coding upstream 178759 67396880 ~ 67397112 (+)
G738126 NA non-coding upstream 233859 67341197 ~ 67342012 (+)
G738125 NA non-coding upstream 238510 67336689 ~ 67337361 (+)
G738078 NA non-coding upstream 310537 67265106 ~ 67265334 (+)
G738262 NA non-coding downstream 684 67576771 ~ 67577106 (+)
G738344 LOC106569180 non-coding downstream 197361 67773448 ~ 67775640 (+)
G738367 NA non-coding downstream 226235 67802322 ~ 67804768 (+)
G738793 LOC100380853 non-coding downstream 297188 67873275 ~ 67873508 (+)
G738798 NA non-coding downstream 306776 67882863 ~ 67883114 (+)
G738244 NA other upstream 28262 67546129 ~ 67547609 (+)
G738020 NA other upstream 343958 67231182 ~ 67231913 (+)
G737783 NA other upstream 360242 67170467 ~ 67215629 (+)
G737234 gs02 other upstream 773791 66798573 ~ 66802080 (+)
kncn kncn other upstream 871786 66699211 ~ 66704200 (+)
G739648 NA other downstream 1282296 68858383 ~ 68858753 (+)
G739670 NA other downstream 1327278 68903365 ~ 68906965 (+)
G739708 NA other downstream 1428250 69004337 ~ 69005116 (+)
G740827 ripk1 other downstream 1960313 69536400 ~ 69538276 (+)

Expression


Co-expression Network