G738793 (LOC100380853)



Basic Information


Item Value
gene id G738793
gene name LOC100380853
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 67873275 ~ 67873508 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU838913
ccgagagtaatgggcaggtggagcgagTAAACCAGggtgtgggcaggtttctgcggtcgtattgccgggaccggccaggggagtgggggAGGAATGTTCCTTGGGCTGAGCTCGCTCAGAACTCCCTTCGCCACTCCTCGACTAACATGTCTCCCTTCCAGTGTGTGTTGGGCTACCAAccggtcctggccccatggcatcagagccagaccgacgctcctgcggtggaggaat

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU838913 True 234 lncRNA 0.62 1 67873275 67873508

Neighbor


gene id symbol gene type direction distance location
LOC110530969 LOC106569181 coding upstream 103789 67759384 ~ 67769486 (+)
LOC110530410 LOC106569184 coding upstream 146333 67693817 ~ 67726942 (+)
LOC110530407 LOC106569186 coding upstream 179633 67577845 ~ 67693642 (+)
LOC110530403 LOC106569190 coding upstream 398973 67430853 ~ 67474302 (+)
LOC110530401 LOC106599252 coding upstream 443204 67290677 ~ 67430071 (+)
LOC110530413 NA coding downstream 31008 67904516 ~ 67924427 (+)
LOC110530418 LOC106569175 coding downstream 312399 68185907 ~ 68198975 (+)
LOC118965633 NA coding downstream 601895 68475403 ~ 68506363 (+)
LOC110530424 LOC106569169 coding downstream 999929 68873437 ~ 68898424 (+)
LOC110529135 NA coding downstream 1131738 69005246 ~ 69006608 (+)
G738367 NA non-coding upstream 68507 67802322 ~ 67804768 (+)
G738344 LOC106569180 non-coding upstream 97635 67773448 ~ 67775640 (+)
G738262 NA non-coding upstream 296169 67576771 ~ 67577106 (+)
G738260 NA non-coding upstream 297188 67575871 ~ 67576087 (+)
G738798 NA non-coding downstream 9355 67882863 ~ 67883114 (+)
G738832 NA non-coding downstream 51099 67924607 ~ 67983064 (+)
G738835 NA non-coding downstream 54002 67927510 ~ 67928146 (+)
G738866 NA non-coding downstream 116530 67990038 ~ 67992670 (+)
G738972 NA non-coding downstream 289886 68163394 ~ 68167270 (+)
G738244 NA other upstream 325666 67546129 ~ 67547609 (+)
G738020 NA other upstream 641362 67231182 ~ 67231913 (+)
G737783 NA other upstream 657646 67170467 ~ 67215629 (+)
G737234 gs02 other upstream 1071195 66798573 ~ 66802080 (+)
kncn kncn other upstream 1169190 66699211 ~ 66704200 (+)
G739648 NA other downstream 984875 68858383 ~ 68858753 (+)
G739670 NA other downstream 1029857 68903365 ~ 68906965 (+)
G739708 NA other downstream 1130829 69004337 ~ 69005116 (+)
G740827 ripk1 other downstream 1662892 69536400 ~ 69538276 (+)

Expression



Co-expression Network